Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.15■□□□□ 0.5
PCNAP12004 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PCNAP12004 SLC25A1P4-201ENST00000567977 778 ntBASIC18.15■□□□□ 0.5
PCNAP12004 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.15■□□□□ 0.5
PCNAP12004 AC093525.10-201ENST00000625130 1569 ntBASIC18.15■□□□□ 0.5
PCNAP12004 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCNAP12004 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCNAP12004 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PCNAP12004 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCNAP12004 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PCNAP12004 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
PCNAP12004 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.15■□□□□ 0.5
PCNAP12004 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCNAP12004 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PCNAP12004 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.15■□□□□ 0.5
PCNAP12004 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCNAP12004 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PCNAP12004 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PCNAP12004 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
PCNAP12004 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.14■□□□□ 0.49
PCNAP12004 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 AC135050.7-201ENST00000624508 2218 ntBASIC18.14■□□□□ 0.49
PCNAP12004 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
PCNAP12004 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.14■□□□□ 0.49
PCNAP12004 MIR718-201ENST00000390190 70 ntBASIC18.14■□□□□ 0.49
PCNAP12004 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.14■□□□□ 0.49
PCNAP12004 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.14■□□□□ 0.49
PCNAP12004 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.14■□□□□ 0.49
PCNAP12004 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
PCNAP12004 AP000692.2-201ENST00000608391 879 ntBASIC18.14■□□□□ 0.49
PCNAP12004 AC026471.5-201ENST00000615068 467 ntBASIC18.14■□□□□ 0.49
PCNAP12004 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.14■□□□□ 0.49
PCNAP12004 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.14■□□□□ 0.49
PCNAP12004 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
PCNAP12004 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.14■□□□□ 0.49
PCNAP12004 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.14■□□□□ 0.49
PCNAP12004 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PCNAP12004 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PCNAP12004 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PCNAP12004 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCNAP12004 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCNAP12004 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCNAP12004 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCNAP12004 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PCNAP12004 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
PCNAP12004 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.13■□□□□ 0.49
PCNAP12004 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.13■□□□□ 0.49
PCNAP12004 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCNAP12004 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.13■□□□□ 0.49
PCNAP12004 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.13■□□□□ 0.49
PCNAP12004 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.13■□□□□ 0.49
PCNAP12004 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.13■□□□□ 0.49
PCNAP12004 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.13■□□□□ 0.49
PCNAP12004 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.13■□□□□ 0.49
PCNAP12004 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
PCNAP12004 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.13■□□□□ 0.49
PCNAP12004 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PCNAP12004 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
PCNAP12004 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.12■□□□□ 0.49
PCNAP12004 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.12■□□□□ 0.49
PCNAP12004 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCNAP12004 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCNAP12004 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
PCNAP12004 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.12■□□□□ 0.49
PCNAP12004 AC116562.2-201ENST00000507042 360 ntBASIC18.12■□□□□ 0.49
PCNAP12004 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.12■□□□□ 0.49
PCNAP12004 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.12■□□□□ 0.49
PCNAP12004 REXO1L10P-201ENST00000615707 1290 ntBASIC18.12■□□□□ 0.49
PCNAP12004 REXO1L12P-201ENST00000622156 912 ntBASIC18.12■□□□□ 0.49
PCNAP12004 AP006294.2-201ENST00000641667 209 ntBASIC18.12■□□□□ 0.49
PCNAP12004 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCNAP12004 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.12■□□□□ 0.49
PCNAP12004 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.12■□□□□ 0.49
PCNAP12004 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCNAP12004 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.12■□□□□ 0.49
PCNAP12004 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms