Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.57■□□□□ 0.72
RARAP10276 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.57■□□□□ 0.72
RARAP10276 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.57■□□□□ 0.72
RARAP10276 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.57■□□□□ 0.72
RARAP10276 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.57■□□□□ 0.72
RARAP10276 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RARAP10276 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RARAP10276 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RARAP10276 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RARAP10276 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.57■□□□□ 0.72
RARAP10276 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
RARAP10276 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RARAP10276 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RARAP10276 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RARAP10276 AP000997.3-201ENST00000623333 2250 ntBASIC19.56■□□□□ 0.72
RARAP10276 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RARAP10276 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RARAP10276 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RARAP10276 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RARAP10276 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.56■□□□□ 0.72
RARAP10276 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
RARAP10276 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RARAP10276 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
RARAP10276 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.56■□□□□ 0.72
RARAP10276 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RARAP10276 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.56■□□□□ 0.72
RARAP10276 MFAP1P1-201ENST00000442257 1255 ntBASIC19.56■□□□□ 0.72
RARAP10276 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.56■□□□□ 0.72
RARAP10276 AC097488.1-201ENST00000507834 756 ntBASIC19.56■□□□□ 0.72
RARAP10276 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.56■□□□□ 0.72
RARAP10276 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.56■□□□□ 0.72
RARAP10276 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.56■□□□□ 0.72
RARAP10276 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RARAP10276 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.56■□□□□ 0.72
RARAP10276 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RARAP10276 AC068880.1-201ENST00000507289 2297 ntBASIC19.56■□□□□ 0.72
RARAP10276 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RARAP10276 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.56■□□□□ 0.72
RARAP10276 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RARAP10276 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.56■□□□□ 0.72
RARAP10276 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RARAP10276 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.56■□□□□ 0.72
RARAP10276 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.56■□□□□ 0.72
RARAP10276 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RARAP10276 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.56■□□□□ 0.72
RARAP10276 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RARAP10276 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RARAP10276 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RARAP10276 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RARAP10276 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RARAP10276 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RARAP10276 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RARAP10276 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RARAP10276 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RARAP10276 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RARAP10276 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RARAP10276 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RARAP10276 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.55■□□□□ 0.72
RARAP10276 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RARAP10276 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.55■□□□□ 0.72
RARAP10276 AP003071.4-201ENST00000562276 1284 ntBASIC19.55■□□□□ 0.72
RARAP10276 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.55■□□□□ 0.72
RARAP10276 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.55■□□□□ 0.72
RARAP10276 AC008622.2-201ENST00000617006 1229 ntBASIC19.55■□□□□ 0.72
RARAP10276 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.55■□□□□ 0.72
RARAP10276 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.55■□□□□ 0.72
RARAP10276 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.55■□□□□ 0.72
RARAP10276 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.55■□□□□ 0.72
RARAP10276 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RARAP10276 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.55■□□□□ 0.72
RARAP10276 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.55■□□□□ 0.72
RARAP10276 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.54■□□□□ 0.72
RARAP10276 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.54■□□□□ 0.72
RARAP10276 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARAP10276 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARAP10276 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.54■□□□□ 0.72
RARAP10276 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARAP10276 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RARAP10276 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RARAP10276 MIR718-201ENST00000390190 70 ntBASIC19.54■□□□□ 0.72
RARAP10276 TSPY7P-201ENST00000431358 1114 ntBASIC19.54■□□□□ 0.72
RARAP10276 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARAP10276 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.54■□□□□ 0.72
RARAP10276 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RARAP10276 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RARAP10276 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.54■□□□□ 0.72
RARAP10276 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARAP10276 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.54■□□□□ 0.72
RARAP10276 RCC2P3-201ENST00000418112 1537 ntBASIC19.54■□□□□ 0.72
RARAP10276 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RARAP10276 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.54■□□□□ 0.72
RARAP10276 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARAP10276 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RARAP10276 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
RARAP10276 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RARAP10276 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms