Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC15.48■□□□□ 0.07
CTSDP07339 AC120498.8-201ENST00000614275 531 ntBASIC15.48■□□□□ 0.07
CTSDP07339 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
CTSDP07339 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CTSDP07339 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CTSDP07339 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CTSDP07339 AC092368.3-202ENST00000574180 1591 ntBASIC15.48■□□□□ 0.07
CTSDP07339 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CTSDP07339 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.48■□□□□ 0.07
CTSDP07339 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CTSDP07339 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.48■□□□□ 0.07
CTSDP07339 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.48■□□□□ 0.07
CTSDP07339 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CTSDP07339 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTSDP07339 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.47■□□□□ 0.07
CTSDP07339 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTSDP07339 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTSDP07339 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
CTSDP07339 MIR663A-201ENST00000385250 93 ntBASIC15.47■□□□□ 0.07
CTSDP07339 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CTSDP07339 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC15.47■□□□□ 0.07
CTSDP07339 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.47■□□□□ 0.07
CTSDP07339 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.47■□□□□ 0.07
CTSDP07339 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTSDP07339 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CTSDP07339 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC15.47■□□□□ 0.07
CTSDP07339 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC15.47■□□□□ 0.07
CTSDP07339 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC15.47■□□□□ 0.07
CTSDP07339 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.47■□□□□ 0.07
CTSDP07339 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CTSDP07339 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.47■□□□□ 0.07
CTSDP07339 HLA-A-209ENST00000638375 975 ntBASIC15.47■□□□□ 0.07
CTSDP07339 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTSDP07339 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.47■□□□□ 0.07
CTSDP07339 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTSDP07339 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTSDP07339 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTSDP07339 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CTSDP07339 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.46■□□□□ 0.07
CTSDP07339 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC15.46■□□□□ 0.07
CTSDP07339 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 MIPEPP3-201ENST00000412105 444 ntBASIC15.46■□□□□ 0.07
CTSDP07339 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.46■□□□□ 0.07
CTSDP07339 AC006970.2-201ENST00000450065 779 ntBASIC15.46■□□□□ 0.07
CTSDP07339 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC15.46■□□□□ 0.07
CTSDP07339 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC15.46■□□□□ 0.07
CTSDP07339 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.46■□□□□ 0.07
CTSDP07339 AC091874.3-201ENST00000512672 1195 ntBASIC15.46■□□□□ 0.07
CTSDP07339 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
CTSDP07339 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 HLA-B-256ENST00000639848 1089 ntBASIC15.46■□□□□ 0.07
CTSDP07339 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.46■□□□□ 0.07
CTSDP07339 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CTSDP07339 AC008556.1-201ENST00000610908 2040 ntBASIC15.46■□□□□ 0.07
CTSDP07339 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CTSDP07339 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CTSDP07339 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 FLJ13224-201ENST00000313737 1514 ntBASIC15.45■□□□□ 0.06
CTSDP07339 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.45■□□□□ 0.06
CTSDP07339 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.45■□□□□ 0.06
CTSDP07339 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.45■□□□□ 0.06
CTSDP07339 AC092118.2-201ENST00000613495 667 ntBASIC15.45■□□□□ 0.06
CTSDP07339 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.45■□□□□ 0.06
CTSDP07339 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CTSDP07339 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CTSDP07339 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
CTSDP07339 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CTSDP07339 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
CTSDP07339 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.45■□□□□ 0.06
CTSDP07339 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.45■□□□□ 0.06
CTSDP07339 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CTSDP07339 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.45■□□□□ 0.06
CTSDP07339 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms