Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ZBED1O96006 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ZBED1O96006 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.66■□□□□ 0.74
ZBED1O96006 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
ZBED1O96006 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ZBED1O96006 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.66■□□□□ 0.74
ZBED1O96006 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.66■□□□□ 0.74
ZBED1O96006 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.66■□□□□ 0.74
ZBED1O96006 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.66■□□□□ 0.74
ZBED1O96006 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.66■□□□□ 0.74
ZBED1O96006 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
ZBED1O96006 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ZBED1O96006 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.66■□□□□ 0.74
ZBED1O96006 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.65■□□□□ 0.74
ZBED1O96006 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZBED1O96006 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ZBED1O96006 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.65■□□□□ 0.74
ZBED1O96006 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
ZBED1O96006 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
ZBED1O96006 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.65■□□□□ 0.74
ZBED1O96006 AC104076.2-201ENST00000448912 469 ntBASIC19.65■□□□□ 0.74
ZBED1O96006 COX11P1-201ENST00000489116 835 ntBASIC19.65■□□□□ 0.74
ZBED1O96006 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.65■□□□□ 0.74
ZBED1O96006 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ZBED1O96006 NEK4P2-201ENST00000580004 1012 ntBASIC19.65■□□□□ 0.74
ZBED1O96006 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
ZBED1O96006 AC006011.2-201ENST00000621313 1158 ntBASIC19.65■□□□□ 0.74
ZBED1O96006 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ZBED1O96006 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.65■□□□□ 0.74
ZBED1O96006 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.65■□□□□ 0.74
ZBED1O96006 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.65■□□□□ 0.74
ZBED1O96006 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.65■□□□□ 0.74
ZBED1O96006 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ZBED1O96006 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
ZBED1O96006 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ZBED1O96006 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZBED1O96006 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.64■□□□□ 0.74
ZBED1O96006 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.64■□□□□ 0.74
ZBED1O96006 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.64■□□□□ 0.74
ZBED1O96006 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
ZBED1O96006 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
ZBED1O96006 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZBED1O96006 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZBED1O96006 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZBED1O96006 MIR564-202ENST00000385049 94 ntBASIC19.64■□□□□ 0.73
ZBED1O96006 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.64■□□□□ 0.73
ZBED1O96006 AC139887.4-201ENST00000607877 719 ntBASIC19.64■□□□□ 0.73
ZBED1O96006 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.64■□□□□ 0.73
ZBED1O96006 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZBED1O96006 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZBED1O96006 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.64■□□□□ 0.73
ZBED1O96006 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZBED1O96006 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.64■□□□□ 0.73
ZBED1O96006 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ZBED1O96006 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZBED1O96006 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ZBED1O96006 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZBED1O96006 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ZBED1O96006 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.63■□□□□ 0.73
ZBED1O96006 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ZBED1O96006 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms