Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GGPS1O95749 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC20.88■□□□□ 0.93
GGPS1O95749 AC005332.7-201ENST00000614046 2005 ntBASIC20.88■□□□□ 0.93
GGPS1O95749 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
GGPS1O95749 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
GGPS1O95749 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GGPS1O95749 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
GGPS1O95749 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GGPS1O95749 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
GGPS1O95749 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
GGPS1O95749 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
GGPS1O95749 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
GGPS1O95749 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GGPS1O95749 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.87■□□□□ 0.93
GGPS1O95749 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GGPS1O95749 HEIH-201ENST00000623091 1652 ntBASIC20.87■□□□□ 0.93
GGPS1O95749 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GGPS1O95749 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.87■□□□□ 0.93
GGPS1O95749 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GGPS1O95749 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.87■□□□□ 0.93
GGPS1O95749 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
GGPS1O95749 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
GGPS1O95749 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.87■□□□□ 0.93
GGPS1O95749 KRT8P26-201ENST00000534154 1276 ntBASIC20.87■□□□□ 0.93
GGPS1O95749 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.87■□□□□ 0.93
GGPS1O95749 RNF126P1-202ENST00000569893 925 ntBASIC20.87■□□□□ 0.93
GGPS1O95749 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GGPS1O95749 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.87■□□□□ 0.93
GGPS1O95749 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.87■□□□□ 0.93
GGPS1O95749 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GGPS1O95749 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.87■□□□□ 0.93
GGPS1O95749 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.87■□□□□ 0.93
GGPS1O95749 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GGPS1O95749 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GGPS1O95749 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
GGPS1O95749 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
GGPS1O95749 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
GGPS1O95749 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GGPS1O95749 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.86■□□□□ 0.93
GGPS1O95749 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GGPS1O95749 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GGPS1O95749 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
GGPS1O95749 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.86■□□□□ 0.93
GGPS1O95749 AC087289.5-201ENST00000586076 3175 ntBASIC20.86■□□□□ 0.93
GGPS1O95749 AL357033.4-201ENST00000617703 1807 ntBASIC20.86■□□□□ 0.93
GGPS1O95749 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
GGPS1O95749 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
GGPS1O95749 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GGPS1O95749 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.86■□□□□ 0.93
GGPS1O95749 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
GGPS1O95749 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GGPS1O95749 AL450487.1-201ENST00000426799 995 ntBASIC20.86■□□□□ 0.93
GGPS1O95749 AP002383.4-201ENST00000442518 975 ntBASIC20.86■□□□□ 0.93
GGPS1O95749 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
GGPS1O95749 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.86■□□□□ 0.93
GGPS1O95749 AC092329.2-201ENST00000598402 547 ntBASIC20.86■□□□□ 0.93
GGPS1O95749 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.86■□□□□ 0.93
GGPS1O95749 Z98044.1-201ENST00000632503 1764 ntBASIC20.86■□□□□ 0.93
GGPS1O95749 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
GGPS1O95749 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
GGPS1O95749 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
GGPS1O95749 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.86■□□□□ 0.93
GGPS1O95749 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.85■□□□□ 0.93
GGPS1O95749 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GGPS1O95749 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
GGPS1O95749 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
GGPS1O95749 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GGPS1O95749 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GGPS1O95749 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GGPS1O95749 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
GGPS1O95749 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.85■□□□□ 0.93
GGPS1O95749 AL161938.1-201ENST00000569833 2180 ntBASIC20.85■□□□□ 0.93
GGPS1O95749 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.85■□□□□ 0.93
GGPS1O95749 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GGPS1O95749 TSPY22P-201ENST00000427496 604 ntBASIC20.85■□□□□ 0.93
GGPS1O95749 PVRIG2P-201ENST00000435460 978 ntBASIC20.85■□□□□ 0.93
GGPS1O95749 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.85■□□□□ 0.93
GGPS1O95749 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.85■□□□□ 0.93
GGPS1O95749 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.85■□□□□ 0.93
GGPS1O95749 MIR3180-1-201ENST00000580374 94 ntBASIC20.85■□□□□ 0.93
GGPS1O95749 MIR3180-4-201ENST00000582223 153 ntBASIC20.85■□□□□ 0.93
GGPS1O95749 MIR3180-3-201ENST00000584616 94 ntBASIC20.85■□□□□ 0.93
GGPS1O95749 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GGPS1O95749 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
GGPS1O95749 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
GGPS1O95749 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GGPS1O95749 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
GGPS1O95749 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
GGPS1O95749 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
GGPS1O95749 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.84■□□□□ 0.93
GGPS1O95749 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
GGPS1O95749 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
GGPS1O95749 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.84■□□□□ 0.93
GGPS1O95749 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
GGPS1O95749 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms