Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MYLKP1-201ENST00000509077 1580 ntBASIC21.65■■□□□ 1.06
CDKL5O76039 AC036111.1-201ENST00000533973 1582 ntBASIC21.65■■□□□ 1.06
CDKL5O76039 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL5O76039 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CDKL5O76039 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKL5O76039 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKL5O76039 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKL5O76039 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CDKL5O76039 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL5O76039 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL5O76039 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL5O76039 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.64■■□□□ 1.05
CDKL5O76039 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CDKL5O76039 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CDKL5O76039 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.64■■□□□ 1.05
CDKL5O76039 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.64■■□□□ 1.05
CDKL5O76039 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL5O76039 GXYLT1P6-201ENST00000456472 1187 ntBASIC21.64■■□□□ 1.05
CDKL5O76039 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL5O76039 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.64■■□□□ 1.05
CDKL5O76039 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL5O76039 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.64■■□□□ 1.05
CDKL5O76039 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.64■■□□□ 1.05
CDKL5O76039 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CDKL5O76039 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL5O76039 BCL2-203ENST00000589955 5011 ntBASIC21.64■■□□□ 1.05
CDKL5O76039 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL5O76039 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL5O76039 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CDKL5O76039 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
CDKL5O76039 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CDKL5O76039 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.63■■□□□ 1.05
CDKL5O76039 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC21.63■■□□□ 1.05
CDKL5O76039 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.63■■□□□ 1.05
CDKL5O76039 WWOX-216ENST00000569818 525 ntBASIC21.63■■□□□ 1.05
CDKL5O76039 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC21.63■■□□□ 1.05
CDKL5O76039 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CDKL5O76039 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CDKL5O76039 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CDKL5O76039 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL5O76039 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL5O76039 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CDKL5O76039 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL5O76039 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL5O76039 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL5O76039 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL5O76039 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC21.62■■□□□ 1.05
CDKL5O76039 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL5O76039 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL5O76039 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC21.62■■□□□ 1.05
CDKL5O76039 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL5O76039 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL5O76039 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL5O76039 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CDKL5O76039 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.62■■□□□ 1.05
CDKL5O76039 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.61■■□□□ 1.05
CDKL5O76039 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.61■■□□□ 1.05
CDKL5O76039 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL5O76039 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.61■■□□□ 1.05
CDKL5O76039 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.61■■□□□ 1.05
CDKL5O76039 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL5O76039 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL5O76039 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CDKL5O76039 CYP2D8P-201ENST00000433633 1490 ntBASIC21.61■■□□□ 1.05
CDKL5O76039 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL5O76039 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.61■■□□□ 1.05
CDKL5O76039 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL5O76039 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL5O76039 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL5O76039 CR769767.2-201ENST00000622735 460 ntBASIC21.61■■□□□ 1.05
CDKL5O76039 AC010947.1-201ENST00000623454 693 ntBASIC21.61■■□□□ 1.05
CDKL5O76039 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.61■■□□□ 1.05
CDKL5O76039 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
CDKL5O76039 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CDKL5O76039 KRT8P7-201ENST00000533003 1432 ntBASIC21.61■■□□□ 1.05
CDKL5O76039 KRT8P9-201ENST00000558927 1449 ntBASIC21.61■■□□□ 1.05
CDKL5O76039 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CDKL5O76039 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CDKL5O76039 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.61■■□□□ 1.05
CDKL5O76039 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL5O76039 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL5O76039 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL5O76039 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL5O76039 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.6■■□□□ 1.05
CDKL5O76039 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL5O76039 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CDKL5O76039 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.6■■□□□ 1.05
CDKL5O76039 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms