Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CNOT3O75175 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC18.04■□□□□ 0.48
CNOT3O75175 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
CNOT3O75175 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.04■□□□□ 0.48
CNOT3O75175 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.04■□□□□ 0.48
CNOT3O75175 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.04■□□□□ 0.48
CNOT3O75175 DUX4L26-201ENST00000489078 1255 ntBASIC18.04■□□□□ 0.48
CNOT3O75175 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CNOT3O75175 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CNOT3O75175 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.04■□□□□ 0.48
CNOT3O75175 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.04■□□□□ 0.48
CNOT3O75175 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.04■□□□□ 0.48
CNOT3O75175 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CNOT3O75175 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.03■□□□□ 0.48
CNOT3O75175 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.03■□□□□ 0.48
CNOT3O75175 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT3O75175 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CNOT3O75175 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT3O75175 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT3O75175 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CNOT3O75175 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.03■□□□□ 0.48
CNOT3O75175 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT3O75175 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT3O75175 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CNOT3O75175 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.03■□□□□ 0.48
CNOT3O75175 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.03■□□□□ 0.48
CNOT3O75175 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CNOT3O75175 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.03■□□□□ 0.48
CNOT3O75175 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT3O75175 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT3O75175 HMGA1P5-201ENST00000412453 271 ntBASIC18.03■□□□□ 0.48
CNOT3O75175 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.03■□□□□ 0.48
CNOT3O75175 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.03■□□□□ 0.48
CNOT3O75175 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.03■□□□□ 0.48
CNOT3O75175 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT3O75175 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.03■□□□□ 0.48
CNOT3O75175 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT3O75175 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT3O75175 ZNF815P-204ENST00000434898 1737 ntBASIC18.03■□□□□ 0.48
CNOT3O75175 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.03■□□□□ 0.48
CNOT3O75175 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CNOT3O75175 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT3O75175 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CNOT3O75175 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.02■□□□□ 0.48
CNOT3O75175 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT3O75175 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT3O75175 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT3O75175 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.02■□□□□ 0.48
CNOT3O75175 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.02■□□□□ 0.48
CNOT3O75175 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT3O75175 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.02■□□□□ 0.48
CNOT3O75175 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CNOT3O75175 LIN28AP1-201ENST00000429574 405 ntBASIC18.02■□□□□ 0.48
CNOT3O75175 CCR12P-201ENST00000446203 998 ntBASIC18.02■□□□□ 0.48
CNOT3O75175 ATP5G1P1-201ENST00000448724 379 ntBASIC18.02■□□□□ 0.48
CNOT3O75175 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CNOT3O75175 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.02■□□□□ 0.48
CNOT3O75175 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.02■□□□□ 0.48
CNOT3O75175 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.02■□□□□ 0.47
CNOT3O75175 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNOT3O75175 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNOT3O75175 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.02■□□□□ 0.47
CNOT3O75175 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CNOT3O75175 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.01■□□□□ 0.47
CNOT3O75175 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT3O75175 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT3O75175 HTR7P1-202ENST00000624664 4411 ntBASIC18.01■□□□□ 0.47
CNOT3O75175 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CNOT3O75175 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT3O75175 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.01■□□□□ 0.47
CNOT3O75175 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT3O75175 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT3O75175 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT3O75175 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT3O75175 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT3O75175 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT3O75175 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT3O75175 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.01■□□□□ 0.47
CNOT3O75175 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CNOT3O75175 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CNOT3O75175 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms