Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PLOD3O60568 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PLOD3O60568 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PLOD3O60568 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.56■□□□□ 0.4
PLOD3O60568 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.56■□□□□ 0.4
PLOD3O60568 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.56■□□□□ 0.4
PLOD3O60568 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.56■□□□□ 0.4
PLOD3O60568 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.56■□□□□ 0.4
PLOD3O60568 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.56■□□□□ 0.4
PLOD3O60568 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.56■□□□□ 0.4
PLOD3O60568 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.56■□□□□ 0.4
PLOD3O60568 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.56■□□□□ 0.4
PLOD3O60568 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.56■□□□□ 0.4
PLOD3O60568 AP000525.1-201ENST00000608286 694 ntBASIC17.56■□□□□ 0.4
PLOD3O60568 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.56■□□□□ 0.4
PLOD3O60568 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.56■□□□□ 0.4
PLOD3O60568 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
PLOD3O60568 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
PLOD3O60568 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
PLOD3O60568 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PLOD3O60568 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.55■□□□□ 0.4
PLOD3O60568 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PLOD3O60568 AC007613.1-201ENST00000572811 2597 ntBASIC17.55■□□□□ 0.4
PLOD3O60568 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
PLOD3O60568 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PLOD3O60568 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.55■□□□□ 0.4
PLOD3O60568 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PLOD3O60568 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PLOD3O60568 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PLOD3O60568 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PLOD3O60568 SLC25A1P2-201ENST00000430693 912 ntBASIC17.55■□□□□ 0.4
PLOD3O60568 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PLOD3O60568 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.55■□□□□ 0.4
PLOD3O60568 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PLOD3O60568 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PLOD3O60568 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PLOD3O60568 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PLOD3O60568 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
PLOD3O60568 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PLOD3O60568 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PLOD3O60568 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PLOD3O60568 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.55■□□□□ 0.4
PLOD3O60568 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
PLOD3O60568 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PLOD3O60568 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PLOD3O60568 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.54■□□□□ 0.4
PLOD3O60568 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.54■□□□□ 0.4
PLOD3O60568 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.54■□□□□ 0.4
PLOD3O60568 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PLOD3O60568 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PLOD3O60568 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PLOD3O60568 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PLOD3O60568 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PLOD3O60568 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PLOD3O60568 MTMR9LP-203ENST00000426597 1545 ntBASIC17.54■□□□□ 0.4
PLOD3O60568 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
PLOD3O60568 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
PLOD3O60568 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.54■□□□□ 0.4
PLOD3O60568 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
PLOD3O60568 AC008622.2-201ENST00000617006 1229 ntBASIC17.54■□□□□ 0.4
PLOD3O60568 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.54■□□□□ 0.4
PLOD3O60568 AL109659.2-201ENST00000606809 1674 ntBASIC17.54■□□□□ 0.4
PLOD3O60568 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.54■□□□□ 0.4
PLOD3O60568 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.54■□□□□ 0.4
PLOD3O60568 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.54■□□□□ 0.4
PLOD3O60568 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PLOD3O60568 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PLOD3O60568 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.53■□□□□ 0.4
PLOD3O60568 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 RCC2P3-201ENST00000418112 1537 ntBASIC17.53■□□□□ 0.4
PLOD3O60568 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.53■□□□□ 0.4
PLOD3O60568 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 AL596275.1-201ENST00000423464 877 ntBASIC17.53■□□□□ 0.4
PLOD3O60568 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.53■□□□□ 0.4
PLOD3O60568 AL023803.3-201ENST00000615559 522 ntBASIC17.53■□□□□ 0.4
PLOD3O60568 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.53■□□□□ 0.4
PLOD3O60568 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PLOD3O60568 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms