Protein–RNA interactions for Protein: O60293

ZFC3H1, Zinc finger C3H1 domain-containing protein, humanhuman

Known RBP Predictions only

Length 1,989 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1O60293 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ZFC3H1O60293 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
ZFC3H1O60293 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
ZFC3H1O60293 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZFC3H1O60293 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
ZFC3H1O60293 AC009113.1-201ENST00000570267 2443 ntBASIC18.39■□□□□ 0.54
ZFC3H1O60293 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
ZFC3H1O60293 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 SPDYE15P-201ENST00000424157 909 ntBASIC18.39■□□□□ 0.53
ZFC3H1O60293 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.39■□□□□ 0.53
ZFC3H1O60293 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ZFC3H1O60293 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ZFC3H1O60293 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
ZFC3H1O60293 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.39■□□□□ 0.53
ZFC3H1O60293 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ZFC3H1O60293 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 AP000523.1-201ENST00000398242 1049 ntBASIC18.39■□□□□ 0.53
ZFC3H1O60293 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.39■□□□□ 0.53
ZFC3H1O60293 MIR3180-5-201ENST00000583743 153 ntBASIC18.39■□□□□ 0.53
ZFC3H1O60293 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.39■□□□□ 0.53
ZFC3H1O60293 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.39■□□□□ 0.53
ZFC3H1O60293 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ZFC3H1O60293 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZFC3H1O60293 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
ZFC3H1O60293 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZFC3H1O60293 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZFC3H1O60293 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZFC3H1O60293 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZFC3H1O60293 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ZFC3H1O60293 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.38■□□□□ 0.53
ZFC3H1O60293 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.38■□□□□ 0.53
ZFC3H1O60293 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZFC3H1O60293 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
ZFC3H1O60293 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZFC3H1O60293 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZFC3H1O60293 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZFC3H1O60293 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ZFC3H1O60293 TSPY5P-201ENST00000426936 936 ntBASIC18.38■□□□□ 0.53
ZFC3H1O60293 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.38■□□□□ 0.53
ZFC3H1O60293 AC139887.4-201ENST00000607877 719 ntBASIC18.38■□□□□ 0.53
ZFC3H1O60293 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZFC3H1O60293 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ZFC3H1O60293 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.38■□□□□ 0.53
ZFC3H1O60293 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.37■□□□□ 0.53
ZFC3H1O60293 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 AC069148.1-201ENST00000608741 768 ntBASIC18.37■□□□□ 0.53
ZFC3H1O60293 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ZFC3H1O60293 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
ZFC3H1O60293 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC18.36■□□□□ 0.53
ZFC3H1O60293 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
ZFC3H1O60293 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
ZFC3H1O60293 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ZFC3H1O60293 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.36■□□□□ 0.53
ZFC3H1O60293 UPK3BP1-201ENST00000428678 509 ntBASIC18.36■□□□□ 0.53
ZFC3H1O60293 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
ZFC3H1O60293 MIR4674-201ENST00000582457 87 ntBASIC18.36■□□□□ 0.53
ZFC3H1O60293 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
ZFC3H1O60293 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.36■□□□□ 0.53
ZFC3H1O60293 AL121894.2-201ENST00000602977 491 ntBASIC18.36■□□□□ 0.53
ZFC3H1O60293 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms