Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PRICKLE3O43900 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
PRICKLE3O43900 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.86■□□□□ 0.45
PRICKLE3O43900 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.86■□□□□ 0.45
PRICKLE3O43900 KRT18P38-201ENST00000449496 1282 ntBASIC17.86■□□□□ 0.45
PRICKLE3O43900 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.86■□□□□ 0.45
PRICKLE3O43900 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PRICKLE3O43900 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 AL049597.2-201ENST00000565575 961 ntBASIC17.86■□□□□ 0.45
PRICKLE3O43900 MIR3917-201ENST00000580971 93 ntBASIC17.86■□□□□ 0.45
PRICKLE3O43900 AC010240.3-201ENST00000607688 395 ntBASIC17.86■□□□□ 0.45
PRICKLE3O43900 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.86■□□□□ 0.45
PRICKLE3O43900 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
PRICKLE3O43900 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.86■□□□□ 0.45
PRICKLE3O43900 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.86■□□□□ 0.45
PRICKLE3O43900 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PRICKLE3O43900 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PRICKLE3O43900 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRICKLE3O43900 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRICKLE3O43900 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRICKLE3O43900 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRICKLE3O43900 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRICKLE3O43900 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRICKLE3O43900 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRICKLE3O43900 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRICKLE3O43900 HOMER2P1-201ENST00000455653 964 ntBASIC17.85■□□□□ 0.45
PRICKLE3O43900 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRICKLE3O43900 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PRICKLE3O43900 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PRICKLE3O43900 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.85■□□□□ 0.45
PRICKLE3O43900 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRICKLE3O43900 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRICKLE3O43900 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 MYLKP1-201ENST00000509077 1580 ntBASIC17.84■□□□□ 0.45
PRICKLE3O43900 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRICKLE3O43900 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRICKLE3O43900 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRICKLE3O43900 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRICKLE3O43900 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRICKLE3O43900 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 SPDYE15P-201ENST00000424157 909 ntBASIC17.84■□□□□ 0.45
PRICKLE3O43900 KRT18P35-201ENST00000510488 1269 ntBASIC17.84■□□□□ 0.45
PRICKLE3O43900 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRICKLE3O43900 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 MYC-208ENST00000641036 567 ntBASIC17.84■□□□□ 0.45
PRICKLE3O43900 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRICKLE3O43900 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRICKLE3O43900 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PRICKLE3O43900 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PRICKLE3O43900 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.84■□□□□ 0.45
PRICKLE3O43900 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRICKLE3O43900 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRICKLE3O43900 AL163051.1-201ENST00000569214 1512 ntBASIC17.83■□□□□ 0.45
PRICKLE3O43900 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRICKLE3O43900 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
PRICKLE3O43900 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.45
PRICKLE3O43900 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRICKLE3O43900 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
PRICKLE3O43900 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
PRICKLE3O43900 ARMC10P1-201ENST00000313754 855 ntBASIC17.83■□□□□ 0.44
PRICKLE3O43900 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
PRICKLE3O43900 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms