Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP2AO43633 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.94■□□□□ 0.94
CHMP2AO43633 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP2AO43633 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP2AO43633 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.94■□□□□ 0.94
CHMP2AO43633 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHMP2AO43633 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CHMP2AO43633 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CHMP2AO43633 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.94■□□□□ 0.94
CHMP2AO43633 AC099343.3-201ENST00000605834 2503 ntBASIC20.94■□□□□ 0.94
CHMP2AO43633 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CHMP2AO43633 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHMP2AO43633 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP2AO43633 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP2AO43633 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 HOMER2P1-201ENST00000455653 964 ntBASIC20.93■□□□□ 0.94
CHMP2AO43633 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP2AO43633 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.93■□□□□ 0.94
CHMP2AO43633 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.93■□□□□ 0.94
CHMP2AO43633 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.93■□□□□ 0.94
CHMP2AO43633 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC20.93■□□□□ 0.94
CHMP2AO43633 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CHMP2AO43633 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHMP2AO43633 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CHMP2AO43633 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2AO43633 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2AO43633 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
CHMP2AO43633 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.92■□□□□ 0.94
CHMP2AO43633 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2AO43633 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2AO43633 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.92■□□□□ 0.94
CHMP2AO43633 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.92■□□□□ 0.94
CHMP2AO43633 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CHMP2AO43633 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.92■□□□□ 0.94
CHMP2AO43633 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CHMP2AO43633 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CHMP2AO43633 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2AO43633 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.92■□□□□ 0.94
CHMP2AO43633 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2AO43633 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CHMP2AO43633 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2AO43633 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2AO43633 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.92■□□□□ 0.94
CHMP2AO43633 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2AO43633 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CHMP2AO43633 AC098818.2-201ENST00000564925 2320 ntBASIC20.92■□□□□ 0.94
CHMP2AO43633 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHMP2AO43633 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP2AO43633 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP2AO43633 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP2AO43633 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP2AO43633 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP2AO43633 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHMP2AO43633 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP2AO43633 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.91■□□□□ 0.94
CHMP2AO43633 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.91■□□□□ 0.94
CHMP2AO43633 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.91■□□□□ 0.94
CHMP2AO43633 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHMP2AO43633 NT5C-211ENST00000582170 653 ntTSL 3 BASIC20.91■□□□□ 0.94
CHMP2AO43633 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP2AO43633 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CHMP2AO43633 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP2AO43633 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.91■□□□□ 0.94
CHMP2AO43633 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP2AO43633 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP2AO43633 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP2AO43633 AL499627.1-201ENST00000569373 2188 ntBASIC20.9■□□□□ 0.94
CHMP2AO43633 AC020763.4-201ENST00000623414 4170 ntBASIC20.9■□□□□ 0.94
CHMP2AO43633 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2AO43633 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2AO43633 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP2AO43633 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2AO43633 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2AO43633 AC112907.2-201ENST00000448639 330 ntBASIC20.9■□□□□ 0.94
CHMP2AO43633 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2AO43633 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP2AO43633 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2AO43633 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.9■□□□□ 0.94
CHMP2AO43633 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
CHMP2AO43633 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.9■□□□□ 0.94
CHMP2AO43633 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2AO43633 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2AO43633 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP2AO43633 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms