Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.32□□□□□ -0.28
PAX4O43316 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC13.32□□□□□ -0.28
PAX4O43316 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PAX4O43316 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
PAX4O43316 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.32□□□□□ -0.28
PAX4O43316 MFAP1P1-201ENST00000442257 1255 ntBASIC13.32□□□□□ -0.28
PAX4O43316 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PAX4O43316 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC13.32□□□□□ -0.28
PAX4O43316 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PAX4O43316 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PAX4O43316 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PAX4O43316 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.32□□□□□ -0.28
PAX4O43316 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.31□□□□□ -0.28
PAX4O43316 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.31□□□□□ -0.28
PAX4O43316 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.31□□□□□ -0.28
PAX4O43316 KATNBL1P6-202ENST00000562413 1466 ntBASIC13.31□□□□□ -0.28
PAX4O43316 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
PAX4O43316 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC13.31□□□□□ -0.28
PAX4O43316 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.31□□□□□ -0.28
PAX4O43316 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PAX4O43316 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 AL049812.1-201ENST00000432563 2267 ntBASIC13.31□□□□□ -0.28
PAX4O43316 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.31□□□□□ -0.28
PAX4O43316 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC13.31□□□□□ -0.28
PAX4O43316 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.31□□□□□ -0.28
PAX4O43316 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.31□□□□□ -0.28
PAX4O43316 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC13.31□□□□□ -0.28
PAX4O43316 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
PAX4O43316 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.31□□□□□ -0.28
PAX4O43316 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC13.31□□□□□ -0.28
PAX4O43316 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
PAX4O43316 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.31□□□□□ -0.28
PAX4O43316 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.31□□□□□ -0.28
PAX4O43316 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
PAX4O43316 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC13.31□□□□□ -0.28
PAX4O43316 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.31□□□□□ -0.28
PAX4O43316 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PAX4O43316 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
PAX4O43316 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PAX4O43316 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC13.3□□□□□ -0.28
PAX4O43316 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.3□□□□□ -0.28
PAX4O43316 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC13.3□□□□□ -0.28
PAX4O43316 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
PAX4O43316 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 RBM17P1-201ENST00000453646 1190 ntBASIC13.3□□□□□ -0.28
PAX4O43316 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
PAX4O43316 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
PAX4O43316 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC13.3□□□□□ -0.28
PAX4O43316 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
PAX4O43316 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.3□□□□□ -0.28
PAX4O43316 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
PAX4O43316 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC13.3□□□□□ -0.28
PAX4O43316 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.3□□□□□ -0.28
PAX4O43316 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC13.3□□□□□ -0.28
PAX4O43316 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms