Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
NDUFA1O15239 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
NDUFA1O15239 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC12.76□□□□□ -0.37
NDUFA1O15239 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NDUFA1O15239 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.75□□□□□ -0.37
NDUFA1O15239 KRT8P8-201ENST00000434750 1448 ntBASIC12.75□□□□□ -0.37
NDUFA1O15239 CROCCP5-201ENST00000436658 830 ntBASIC12.75□□□□□ -0.37
NDUFA1O15239 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.75□□□□□ -0.37
NDUFA1O15239 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC12.75□□□□□ -0.37
NDUFA1O15239 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
NDUFA1O15239 DLX3-202ENST00000512495 834 ntTSL 2 BASIC12.75□□□□□ -0.37
NDUFA1O15239 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
NDUFA1O15239 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC12.75□□□□□ -0.37
NDUFA1O15239 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
NDUFA1O15239 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC12.75□□□□□ -0.37
NDUFA1O15239 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NDUFA1O15239 REXO2-208ENST00000539754 791 ntTSL 2 BASIC12.75□□□□□ -0.37
NDUFA1O15239 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.75□□□□□ -0.37
NDUFA1O15239 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC12.75□□□□□ -0.37
NDUFA1O15239 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC12.75□□□□□ -0.37
NDUFA1O15239 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC12.75□□□□□ -0.37
NDUFA1O15239 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC12.75□□□□□ -0.37
NDUFA1O15239 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC12.75□□□□□ -0.37
NDUFA1O15239 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC12.75□□□□□ -0.37
NDUFA1O15239 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
NDUFA1O15239 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
NDUFA1O15239 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
NDUFA1O15239 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.75□□□□□ -0.37
NDUFA1O15239 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC12.74□□□□□ -0.37
NDUFA1O15239 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
NDUFA1O15239 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.74□□□□□ -0.37
NDUFA1O15239 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.74□□□□□ -0.37
NDUFA1O15239 OR6D1P-203ENST00000641209 4860 ntBASIC12.74□□□□□ -0.37
NDUFA1O15239 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 PXK-206ENST00000463280 2825 ntTSL 2 BASIC12.74□□□□□ -0.37
NDUFA1O15239 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
NDUFA1O15239 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
NDUFA1O15239 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC12.74□□□□□ -0.37
NDUFA1O15239 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC12.74□□□□□ -0.37
NDUFA1O15239 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 BET1L-207ENST00000529614 560 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.74□□□□□ -0.37
NDUFA1O15239 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.74□□□□□ -0.37
NDUFA1O15239 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 PFKL-212ENST00000628044 129 ntTSL 3 BASIC12.74□□□□□ -0.37
NDUFA1O15239 HLA-B-256ENST00000639848 1089 ntBASIC12.74□□□□□ -0.37
NDUFA1O15239 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.74□□□□□ -0.37
NDUFA1O15239 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
NDUFA1O15239 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
NDUFA1O15239 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
NDUFA1O15239 AC012313.1-201ENST00000593393 3059 ntBASIC12.74□□□□□ -0.37
NDUFA1O15239 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
NDUFA1O15239 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC12.74□□□□□ -0.37
NDUFA1O15239 EML3-212ENST00000494176 2901 ntTSL 2 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms