Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH17O14917 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.78■□□□□ 0.44
PCDH17O14917 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH17O14917 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDH17O14917 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
PCDH17O14917 AC005082.1-201ENST00000413042 2259 ntBASIC17.78■□□□□ 0.44
PCDH17O14917 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH17O14917 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH17O14917 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
PCDH17O14917 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH17O14917 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH17O14917 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH17O14917 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH17O14917 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH17O14917 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH17O14917 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH17O14917 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDH17O14917 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH17O14917 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH17O14917 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PCDH17O14917 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.77■□□□□ 0.44
PCDH17O14917 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH17O14917 INGX-201ENST00000359239 846 ntBASIC17.77■□□□□ 0.44
PCDH17O14917 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH17O14917 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH17O14917 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDH17O14917 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH17O14917 NEK4P2-201ENST00000580004 1012 ntBASIC17.77■□□□□ 0.44
PCDH17O14917 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDH17O14917 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDH17O14917 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH17O14917 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH17O14917 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH17O14917 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH17O14917 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH17O14917 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH17O14917 FP475955.4-201ENST00000623131 1990 ntBASIC17.77■□□□□ 0.43
PCDH17O14917 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH17O14917 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH17O14917 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH17O14917 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH17O14917 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
PCDH17O14917 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDH17O14917 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH17O14917 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PCDH17O14917 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH17O14917 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PCDH17O14917 DUX4L26-201ENST00000489078 1255 ntBASIC17.76■□□□□ 0.43
PCDH17O14917 COX11P1-201ENST00000489116 835 ntBASIC17.76■□□□□ 0.43
PCDH17O14917 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH17O14917 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH17O14917 AC141257.4-201ENST00000634557 245 ntBASIC17.76■□□□□ 0.43
PCDH17O14917 AC136944.6-201ENST00000634818 245 ntBASIC17.76■□□□□ 0.43
PCDH17O14917 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PCDH17O14917 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH17O14917 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH17O14917 SDHAP1-207ENST00000440850 2000 ntBASIC17.76■□□□□ 0.43
PCDH17O14917 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH17O14917 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH17O14917 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH17O14917 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH17O14917 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH17O14917 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH17O14917 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH17O14917 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH17O14917 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH17O14917 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH17O14917 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH17O14917 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDH17O14917 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.75■□□□□ 0.43
PCDH17O14917 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PCDH17O14917 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.75■□□□□ 0.43
PCDH17O14917 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH17O14917 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
PCDH17O14917 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH17O14917 AL031598.1-201ENST00000561511 1773 ntBASIC17.75■□□□□ 0.43
PCDH17O14917 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
PCDH17O14917 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
PCDH17O14917 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH17O14917 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.75■□□□□ 0.43
PCDH17O14917 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH17O14917 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.75■□□□□ 0.43
PCDH17O14917 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PCDH17O14917 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms