Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TLR4O00206 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
TLR4O00206 AC093525.10-201ENST00000625130 1569 ntBASIC18.43■□□□□ 0.54
TLR4O00206 AC098818.2-201ENST00000564925 2320 ntBASIC18.43■□□□□ 0.54
TLR4O00206 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
TLR4O00206 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TLR4O00206 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TLR4O00206 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.43■□□□□ 0.54
TLR4O00206 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
TLR4O00206 PRELID1P1-202ENST00000567272 903 ntBASIC18.43■□□□□ 0.54
TLR4O00206 MIR3180-1-201ENST00000580374 94 ntBASIC18.43■□□□□ 0.54
TLR4O00206 MIR3180-3-201ENST00000584616 94 ntBASIC18.43■□□□□ 0.54
TLR4O00206 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.43■□□□□ 0.54
TLR4O00206 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.43■□□□□ 0.54
TLR4O00206 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.43■□□□□ 0.54
TLR4O00206 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TLR4O00206 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.43■□□□□ 0.54
TLR4O00206 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR4O00206 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TLR4O00206 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR4O00206 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TLR4O00206 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR4O00206 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TLR4O00206 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR4O00206 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR4O00206 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.42■□□□□ 0.54
TLR4O00206 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
TLR4O00206 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR4O00206 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR4O00206 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.42■□□□□ 0.54
TLR4O00206 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.42■□□□□ 0.54
TLR4O00206 AP002383.4-201ENST00000442518 975 ntBASIC18.42■□□□□ 0.54
TLR4O00206 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.42■□□□□ 0.54
TLR4O00206 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.42■□□□□ 0.54
TLR4O00206 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.42■□□□□ 0.54
TLR4O00206 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.42■□□□□ 0.54
TLR4O00206 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.42■□□□□ 0.54
TLR4O00206 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.42■□□□□ 0.54
TLR4O00206 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
TLR4O00206 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR4O00206 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TLR4O00206 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
TLR4O00206 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TLR4O00206 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR4O00206 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.41■□□□□ 0.54
TLR4O00206 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
TLR4O00206 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR4O00206 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR4O00206 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR4O00206 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR4O00206 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR4O00206 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TLR4O00206 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.41■□□□□ 0.54
TLR4O00206 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TLR4O00206 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.41■□□□□ 0.54
TLR4O00206 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TLR4O00206 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.41■□□□□ 0.54
TLR4O00206 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.41■□□□□ 0.54
TLR4O00206 AC104390.1-201ENST00000555663 520 ntBASIC18.41■□□□□ 0.54
TLR4O00206 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.41■□□□□ 0.54
TLR4O00206 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TLR4O00206 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
TLR4O00206 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR4O00206 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TLR4O00206 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TLR4O00206 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TLR4O00206 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.41■□□□□ 0.54
TLR4O00206 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.41■□□□□ 0.54
TLR4O00206 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.41■□□□□ 0.54
TLR4O00206 HOXB1-202ENST00000577092 1414 ntBASIC18.4■□□□□ 0.54
TLR4O00206 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.4■□□□□ 0.54
TLR4O00206 FEM1AP3-201ENST00000403722 1741 ntBASIC18.4■□□□□ 0.54
TLR4O00206 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TLR4O00206 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.4■□□□□ 0.54
TLR4O00206 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.4■□□□□ 0.54
TLR4O00206 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TLR4O00206 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TLR4O00206 MIR564-202ENST00000385049 94 ntBASIC18.4■□□□□ 0.54
TLR4O00206 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
TLR4O00206 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC18.4■□□□□ 0.54
TLR4O00206 TSPY22P-201ENST00000427496 604 ntBASIC18.4■□□□□ 0.54
TLR4O00206 CHCHD2P8-201ENST00000429873 447 ntBASIC18.4■□□□□ 0.54
TLR4O00206 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms