Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
DDX39AO00148 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.94■□□□□ 0.94
DDX39AO00148 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDX39AO00148 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.94■□□□□ 0.94
DDX39AO00148 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX39AO00148 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
DDX39AO00148 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX39AO00148 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
DDX39AO00148 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.93■□□□□ 0.94
DDX39AO00148 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
DDX39AO00148 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
DDX39AO00148 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
DDX39AO00148 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 FAM86EP-206ENST00000510506 987 ntBASIC20.93■□□□□ 0.94
DDX39AO00148 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
DDX39AO00148 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.93■□□□□ 0.94
DDX39AO00148 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
DDX39AO00148 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC20.93■□□□□ 0.94
DDX39AO00148 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
DDX39AO00148 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
DDX39AO00148 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
DDX39AO00148 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX39AO00148 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
DDX39AO00148 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.92■□□□□ 0.94
DDX39AO00148 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 PCED1CP-201ENST00000419887 785 ntBASIC20.92■□□□□ 0.94
DDX39AO00148 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX39AO00148 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.92■□□□□ 0.94
DDX39AO00148 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.92■□□□□ 0.94
DDX39AO00148 ZNF444P1-201ENST00000559497 298 ntBASIC20.92■□□□□ 0.94
DDX39AO00148 MIR3917-201ENST00000580971 93 ntBASIC20.92■□□□□ 0.94
DDX39AO00148 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX39AO00148 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.92■□□□□ 0.94
DDX39AO00148 AC010240.3-201ENST00000607688 395 ntBASIC20.92■□□□□ 0.94
DDX39AO00148 AL121956.5-201ENST00000625261 221 ntBASIC20.92■□□□□ 0.94
DDX39AO00148 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
DDX39AO00148 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.92■□□□□ 0.94
DDX39AO00148 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX39AO00148 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX39AO00148 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.92■□□□□ 0.94
DDX39AO00148 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX39AO00148 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.92■□□□□ 0.94
DDX39AO00148 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.92■□□□□ 0.94
DDX39AO00148 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
DDX39AO00148 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX39AO00148 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.91■□□□□ 0.94
DDX39AO00148 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX39AO00148 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX39AO00148 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX39AO00148 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX39AO00148 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX39AO00148 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX39AO00148 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX39AO00148 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
DDX39AO00148 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
DDX39AO00148 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.91■□□□□ 0.94
DDX39AO00148 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
DDX39AO00148 VENTXP5-201ENST00000523979 775 ntBASIC20.91■□□□□ 0.94
DDX39AO00148 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.91■□□□□ 0.94
DDX39AO00148 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.91■□□□□ 0.94
DDX39AO00148 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.91■□□□□ 0.94
DDX39AO00148 AC104390.1-201ENST00000555663 520 ntBASIC20.91■□□□□ 0.94
DDX39AO00148 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
DDX39AO00148 HOXB1-202ENST00000577092 1414 ntBASIC20.91■□□□□ 0.94
DDX39AO00148 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms