Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC188H7C350 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC188H7C350 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC188H7C350 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC188H7C350 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC188H7C350 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC188H7C350 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC188H7C350 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC188H7C350 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC188H7C350 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC188H7C350 FLJ13224-201ENST00000313737 1514 ntBASIC19.38■□□□□ 0.69
CCDC188H7C350 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC188H7C350 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC188H7C350 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC188H7C350 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC188H7C350 NCF1B-203ENST00000435988 1254 ntBASIC19.38■□□□□ 0.69
CCDC188H7C350 THEM4-205ENST00000489410 643 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC188H7C350 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC188H7C350 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.38■□□□□ 0.69
CCDC188H7C350 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC188H7C350 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC188H7C350 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CCDC188H7C350 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC188H7C350 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CCDC188H7C350 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC188H7C350 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CCDC188H7C350 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC188H7C350 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC188H7C350 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC188H7C350 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.37■□□□□ 0.69
CCDC188H7C350 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC188H7C350 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC188H7C350 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC188H7C350 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.37■□□□□ 0.69
CCDC188H7C350 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC188H7C350 FZD10-202ENST00000539839 3282 ntBASIC19.37■□□□□ 0.69
CCDC188H7C350 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC188H7C350 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.37■□□□□ 0.69
CCDC188H7C350 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC188H7C350 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC188H7C350 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.36■□□□□ 0.69
CCDC188H7C350 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 MYLKP1-201ENST00000509077 1580 ntBASIC19.36■□□□□ 0.69
CCDC188H7C350 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 REXO1L9P-201ENST00000604264 2108 ntBASIC19.36■□□□□ 0.69
CCDC188H7C350 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC188H7C350 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CCDC188H7C350 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC188H7C350 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.36■□□□□ 0.69
CCDC188H7C350 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.36■□□□□ 0.69
CCDC188H7C350 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC19.36■□□□□ 0.69
CCDC188H7C350 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CCDC188H7C350 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CCDC188H7C350 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CCDC188H7C350 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CCDC188H7C350 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC188H7C350 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC188H7C350 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CCDC188H7C350 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
CCDC188H7C350 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.35■□□□□ 0.69
CCDC188H7C350 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC188H7C350 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC188H7C350 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC188H7C350 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms