Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 AC092338.2-201ENST00000568827 1415 ntBASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCDC162PA2VCL2 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 AC020763.4-201ENST00000623414 4170 ntBASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 C2orf69P3-201ENST00000565542 1120 ntBASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
CCDC162PA2VCL2 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 KRT8P45-201ENST00000414328 1447 ntBASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 INGX-201ENST00000359239 846 ntBASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 CCR12P-201ENST00000446203 998 ntBASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 AC116562.4-202ENST00000641738 218 ntBASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC162PA2VCL2 AC073592.3-201ENST00000625118 1834 ntBASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 AC112777.1-201ENST00000540175 1423 ntBASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 MMP23A-201ENST00000234610 1017 ntBASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 TSPY14P-201ENST00000303979 915 ntBASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 AC007663.1-201ENST00000438948 1240 ntBASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 MIR3180-5-201ENST00000583743 153 ntBASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 AC010947.1-201ENST00000623454 693 ntBASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.6■□□□□ 0.57
CCDC162PA2VCL2 AC036111.1-201ENST00000533973 1582 ntBASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 BX088651.1-201ENST00000540551 451 ntBASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.59■□□□□ 0.57
CCDC162PA2VCL2 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms