Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 AP005242.2-201ENST00000580065 1175 ntBASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 AP006294.2-201ENST00000641667 209 ntBASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 AC126763.1-201ENST00000552015 2118 ntBASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 BICD1-207ENST00000551848 1962 ntBASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
TRBV6-4A0A1B0GX49 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 CRYGFP-201ENST00000418459 633 ntBASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 MIR4785-201ENST00000585005 73 ntBASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 USP36-216ENST00000589424 970 ntTSL 5 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
TRBV6-4A0A1B0GX49 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
TRBV6-4A0A1B0GX49 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 OR6D1P-202ENST00000641007 5290 ntBASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC008556.1-201ENST00000610908 2040 ntBASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 UNC93B2-201ENST00000285383 730 ntBASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 MIR564-202ENST00000385049 94 ntBASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 AL023284.2-201ENST00000405850 579 ntBASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC008550.1-201ENST00000511500 884 ntBASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 NEFHP1-201ENST00000412845 2629 ntBASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRBV6-4A0A1B0GX49 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms