Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
TRBV5-3A0A0A0MS03 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
TRBV5-3A0A0A0MS03 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 MIR564-202ENST00000385049 94 ntBASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 MESTP1-201ENST00000404287 994 ntBASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 AL353807.1-201ENST00000427475 662 ntBASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 B3GAT3P1-201ENST00000471720 806 ntBASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 KRT18P6-201ENST00000555540 1265 ntBASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRBV5-3A0A0A0MS03 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 AP000593.1-201ENST00000393668 712 ntBASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 CR392000.1-201ENST00000624770 1228 ntBASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRBV5-3A0A0A0MS03 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 AL023284.2-201ENST00000405850 579 ntBASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 MIR6786-201ENST00000616843 113 ntBASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TRBV5-3A0A0A0MS03 KRT8P50-201ENST00000562022 1438 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms