Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 AC008556.1-201ENST00000610908 2040 ntBASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CSNK1G3Q9Y6M4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 MIR3180-1-201ENST00000580374 94 ntBASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 MIR3180-3-201ENST00000584616 94 ntBASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 AC010240.3-201ENST00000607688 395 ntBASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.22■□□□□ 0.51
CSNK1G3Q9Y6M4 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 CHCHD2P8-201ENST00000429873 447 ntBASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CSNK1G3Q9Y6M4 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CSNK1G3Q9Y6M4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CSNK1G3Q9Y6M4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.21■□□□□ 0.5
CSNK1G3Q9Y6M4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 AC026396.1-201ENST00000419388 421 ntBASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 AP002383.4-201ENST00000442518 975 ntBASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 AC034236.2-201ENST00000606662 1610 ntBASIC18.2■□□□□ 0.5
CSNK1G3Q9Y6M4 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CSNK1G3Q9Y6M4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms