Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
PCDHA3Q9Y5H8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 MYLKP1-201ENST00000509077 1580 ntBASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 AC008556.1-201ENST00000610908 2040 ntBASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 MESTP1-201ENST00000404287 994 ntBASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 AC093677.2-201ENST00000600169 1863 ntBASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC19.49■□□□□ 0.71
PCDHA3Q9Y5H8 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 CD99P1-205ENST00000527459 561 ntBASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 AP000692.2-201ENST00000608391 879 ntBASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
PCDHA3Q9Y5H8 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 AC008622.2-201ENST00000617006 1229 ntBASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 FSCN1P1-201ENST00000568912 1481 ntBASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 AC008764.6-201ENST00000595909 2069 ntBASIC19.47■□□□□ 0.71
PCDHA3Q9Y5H8 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PCDHA3Q9Y5H8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PCDHA3Q9Y5H8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms