Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 PRELID1P1-202ENST00000567272 903 ntBASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 AC011498.5-201ENST00000592027 486 ntBASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
PCDHGA9Q9Y5G4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 TSPY23P-201ENST00000440136 739 ntBASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 BX276092.5-203ENST00000456199 560 ntBASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
PCDHGA9Q9Y5G4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 AC092597.1-201ENST00000487352 616 ntBASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 AC111152.3-201ENST00000569699 673 ntBASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
PCDHGA9Q9Y5G4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
PCDHGA9Q9Y5G4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 ZNF815P-204ENST00000434898 1737 ntBASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
PCDHGA9Q9Y5G4 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms