Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 TNRC18P3-201ENST00000441896 2691 ntBASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 AC093787.1-201ENST00000450396 207 ntBASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 AC005829.2-201ENST00000571422 1056 ntBASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 AC005181.1-201ENST00000604782 1256 ntBASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 GAS2L1P1-201ENST00000420145 1480 ntBASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 HEIH-201ENST00000623091 1652 ntBASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
RCL1Q9Y2P8 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 LSM12P1-201ENST00000411836 588 ntBASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 AC011767.1-201ENST00000617410 1153 ntBASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
RCL1Q9Y2P8 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 AC012317.2-201ENST00000623305 2251 ntBASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
RCL1Q9Y2P8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms