Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 ITM2C-210ENST00000620962 501 ntBASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 FAM197Y4-202ENST00000622692 608 ntBASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
HHLA3Q9XRX5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.23
HHLA3Q9XRX5 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
HHLA3Q9XRX5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 SERF2-207ENST00000409614 582 ntTSL 2 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 RPPH1-201ENST00000516869 333 ntBASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 AC141586.3-201ENST00000562166 1838 ntBASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
HHLA3Q9XRX5 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 AL512353.2-201ENST00000448759 1962 ntBASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 ESPNP-201ENST00000270691 2015 ntBASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
HHLA3Q9XRX5 AC141586.5-201ENST00000624546 2050 ntBASIC13.63□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms