Protein–RNA interactions for Protein: Q9UQE7

SMC3, Structural maintenance of chromosomes protein 3, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3Q9UQE7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 MYC-208ENST00000641036 567 ntBASIC21.92■■□□□ 1.1
SMC3Q9UQE7 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 HTR7P1-202ENST00000624664 4411 ntBASIC21.92■■□□□ 1.1
SMC3Q9UQE7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.92■■□□□ 1.1
SMC3Q9UQE7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 FDX2-207ENST00000494368 584 ntTSL 4 BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC21.91■■□□□ 1.1
SMC3Q9UQE7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 KRT16P1-201ENST00000399124 1418 ntBASIC21.9■■□□□ 1.1
SMC3Q9UQE7 AC112777.1-201ENST00000540175 1423 ntBASIC21.9■■□□□ 1.1
SMC3Q9UQE7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 AC128676.1-201ENST00000454392 318 ntBASIC21.9■■□□□ 1.1
SMC3Q9UQE7 C1QBPP2-201ENST00000528754 825 ntBASIC21.9■■□□□ 1.1
SMC3Q9UQE7 AC011298.2-201ENST00000617989 482 ntBASIC21.9■■□□□ 1.1
SMC3Q9UQE7 CR392000.1-201ENST00000624770 1228 ntBASIC21.9■■□□□ 1.1
SMC3Q9UQE7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMC3Q9UQE7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
SMC3Q9UQE7 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMC3Q9UQE7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.89■■□□□ 1.1
SMC3Q9UQE7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.89■■□□□ 1.1
SMC3Q9UQE7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMC3Q9UQE7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMC3Q9UQE7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMC3Q9UQE7 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMC3Q9UQE7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC21.89■■□□□ 1.09
SMC3Q9UQE7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMC3Q9UQE7 AL353807.1-201ENST00000427475 662 ntBASIC21.89■■□□□ 1.09
SMC3Q9UQE7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.89■■□□□ 1.09
SMC3Q9UQE7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SMC3Q9UQE7 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.89■■□□□ 1.09
SMC3Q9UQE7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMC3Q9UQE7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC21.89■■□□□ 1.09
SMC3Q9UQE7 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.89■■□□□ 1.09
SMC3Q9UQE7 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMC3Q9UQE7 AC068880.1-201ENST00000507289 2297 ntBASIC21.89■■□□□ 1.09
SMC3Q9UQE7 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 AC008040.2-201ENST00000461049 708 ntBASIC21.88■■□□□ 1.09
SMC3Q9UQE7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.88■■□□□ 1.09
SMC3Q9UQE7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.88■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms