Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PCDHA4Q9UN74 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PCDHA4Q9UN74 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.28■■□□□ 1
PCDHA4Q9UN74 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC21.28■■□□□ 1
PCDHA4Q9UN74 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.28■■□□□ 1
PCDHA4Q9UN74 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 AIRN-201ENST00000601203 4374 ntBASIC21.28■■□□□ 1
PCDHA4Q9UN74 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 AP000523.1-201ENST00000398242 1049 ntBASIC21.28■■□□□ 1
PCDHA4Q9UN74 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 KRT18P57-201ENST00000443599 1254 ntBASIC21.28■■□□□ 1
PCDHA4Q9UN74 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.28■■□□□ 1
PCDHA4Q9UN74 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.28■■□□□ 1
PCDHA4Q9UN74 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.28■■□□□ 1
PCDHA4Q9UN74 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.28■■□□□ 1
PCDHA4Q9UN74 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.28■■□□□ 1
PCDHA4Q9UN74 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.28■■□□□ 1
PCDHA4Q9UN74 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PCDHA4Q9UN74 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 RCN1P1-201ENST00000400413 996 ntBASIC21.27■■□□□ 1
PCDHA4Q9UN74 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.27■■□□□ 1
PCDHA4Q9UN74 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 BX664615.1-201ENST00000443558 458 ntBASIC21.27■■□□□ 1
PCDHA4Q9UN74 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 AC104390.1-201ENST00000555663 520 ntBASIC21.27■■□□□ 1
PCDHA4Q9UN74 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 AC024243.1-201ENST00000609234 778 ntBASIC21.27■■□□□ 1
PCDHA4Q9UN74 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.27■■□□□ 1
PCDHA4Q9UN74 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC21.27■■□□□ 1
PCDHA4Q9UN74 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHA4Q9UN74 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.27■□□□□ 0.99
PCDHA4Q9UN74 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHA4Q9UN74 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PCDHA4Q9UN74 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 SEC1P-202ENST00000473944 940 ntBASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 COX11P1-201ENST00000489116 835 ntBASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 AC092865.7-201ENST00000641832 219 ntBASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PCDHA4Q9UN74 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms