Protein–RNA interactions for Protein: Q9ULS5

TMCC3, Transmembrane and coiled-coil domain protein 3, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3Q9ULS5 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 FZD10-202ENST00000539839 3282 ntBASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 NCF1B-203ENST00000435988 1254 ntBASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 GUSBP6-202ENST00000438529 1198 ntBASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 HLA-A-209ENST00000638375 975 ntBASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TMCC3Q9ULS5 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 MYC-208ENST00000641036 567 ntBASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 AC020916.1-201ENST00000587762 1774 ntBASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 NBPF21P-201ENST00000425093 1451 ntBASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TMCC3Q9ULS5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 RCC2P6-201ENST00000526625 1557 ntBASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 AL138781.1-201ENST00000566567 1274 ntBASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 C1QL1P1-201ENST00000568105 661 ntBASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.29■□□□□ 0.36
TMCC3Q9ULS5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms