Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CPNE7Q9UBL6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 AL357033.4-201ENST00000617703 1807 ntBASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 SPDYE13P-201ENST00000445314 798 ntBASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 Z98044.1-201ENST00000632503 1764 ntBASIC18.07■□□□□ 0.48
CPNE7Q9UBL6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 AC083906.6-201ENST00000641366 219 ntBASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CPNE7Q9UBL6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 MTMR9LP-203ENST00000426597 1545 ntBASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 AC079602.3-201ENST00000623931 403 ntBASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE7Q9UBL6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE7Q9UBL6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms