Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TREM2Q9NZC2 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREM2Q9NZC2 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.1■□□□□ 0.17
TREM2Q9NZC2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREM2Q9NZC2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TREM2Q9NZC2 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.1■□□□□ 0.17
TREM2Q9NZC2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TREM2Q9NZC2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 KRT18P35-201ENST00000510488 1269 ntBASIC16.09■□□□□ 0.17
TREM2Q9NZC2 AC010203.1-204ENST00000548782 407 ntBASIC16.09■□□□□ 0.17
TREM2Q9NZC2 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 AC006333.2-201ENST00000607957 2099 ntBASIC16.09■□□□□ 0.17
TREM2Q9NZC2 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TREM2Q9NZC2 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.08■□□□□ 0.17
TREM2Q9NZC2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TREM2Q9NZC2 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
TREM2Q9NZC2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.08■□□□□ 0.17
TREM2Q9NZC2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TREM2Q9NZC2 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
TREM2Q9NZC2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
TREM2Q9NZC2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TREM2Q9NZC2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 AL590326.2-201ENST00000625139 305 ntBASIC16.08■□□□□ 0.16
TREM2Q9NZC2 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 AC106820.2-201ENST00000563775 3264 ntBASIC16.08■□□□□ 0.16
TREM2Q9NZC2 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TREM2Q9NZC2 FEM1AP3-201ENST00000403722 1741 ntBASIC16.08■□□□□ 0.16
TREM2Q9NZC2 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 PRSS44-201ENST00000515154 1146 ntBASIC16.07■□□□□ 0.16
TREM2Q9NZC2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 AC116562.4-202ENST00000641738 218 ntBASIC16.07■□□□□ 0.16
TREM2Q9NZC2 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 AC073508.3-201ENST00000619697 1419 ntBASIC16.07■□□□□ 0.16
TREM2Q9NZC2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
TREM2Q9NZC2 IRX1P1-201ENST00000438849 1838 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms