Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 YBX1P1-201ENST00000445822 960 ntBASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 AC016405.3-201ENST00000607710 860 ntBASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.34■□□□□ 0.37
CHCHD3Q9NX63 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHCHD3Q9NX63 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CHCHD3Q9NX63 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHCHD3Q9NX63 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.33■□□□□ 0.37
CHCHD3Q9NX63 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHCHD3Q9NX63 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.33■□□□□ 0.37
CHCHD3Q9NX63 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CHCHD3Q9NX63 AC018553.1-201ENST00000616682 1458 ntBASIC17.33■□□□□ 0.37
CHCHD3Q9NX63 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 MIR638-201ENST00000385237 100 ntBASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 AC013268.1-206ENST00000638368 961 ntBASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 AC112229.1-201ENST00000639295 961 ntBASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.33■□□□□ 0.36
CHCHD3Q9NX63 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 AC007322.4-201ENST00000509611 723 ntBASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 IRX1P1-201ENST00000438849 1838 ntBASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 ZNF815P-204ENST00000434898 1737 ntBASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHCHD3Q9NX63 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CHCHD3Q9NX63 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms