Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 NBPF21P-201ENST00000425093 1451 ntBASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.21■□□□□ 0.19
PCDHB16Q9NRJ7 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHB16Q9NRJ7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
PCDHB16Q9NRJ7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.18
PCDHB16Q9NRJ7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PCDHB16Q9NRJ7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 AL512353.2-201ENST00000448759 1962 ntBASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PCDHB16Q9NRJ7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 AC098934.4-201ENST00000564127 592 ntBASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 NOC2LP2-201ENST00000407594 1944 ntBASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCDHB16Q9NRJ7 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms