Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 NMU-203ENST00000507338 658 ntTSL 3 BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.3■□□□□ 0.36
CHD8Q9HCK8 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 RCN1P2-201ENST00000398357 915 ntBASIC17.29■□□□□ 0.36
CHD8Q9HCK8 MRPL20P1-201ENST00000400819 433 ntBASIC17.29■□□□□ 0.36
CHD8Q9HCK8 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 OR8S1-201ENST00000310194 1080 ntBASIC17.29■□□□□ 0.36
CHD8Q9HCK8 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.29■□□□□ 0.36
CHD8Q9HCK8 AC107918.4-202ENST00000641623 219 ntBASIC17.29■□□□□ 0.36
CHD8Q9HCK8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 AC104390.1-201ENST00000555663 520 ntBASIC17.28■□□□□ 0.36
CHD8Q9HCK8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.28■□□□□ 0.36
CHD8Q9HCK8 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHD8Q9HCK8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CHD8Q9HCK8 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.27■□□□□ 0.36
CHD8Q9HCK8 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHD8Q9HCK8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.27■□□□□ 0.36
CHD8Q9HCK8 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.27■□□□□ 0.36
CHD8Q9HCK8 KRT89P-201ENST00000620027 1478 ntBASIC17.27■□□□□ 0.36
CHD8Q9HCK8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHD8Q9HCK8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.27■□□□□ 0.36
CHD8Q9HCK8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHD8Q9HCK8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHD8Q9HCK8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHD8Q9HCK8 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.27■□□□□ 0.35
CHD8Q9HCK8 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHD8Q9HCK8 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHD8Q9HCK8 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.27■□□□□ 0.35
CHD8Q9HCK8 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHD8Q9HCK8 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.27■□□□□ 0.35
CHD8Q9HCK8 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.27■□□□□ 0.35
CHD8Q9HCK8 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CHD8Q9HCK8 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHD8Q9HCK8 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 AL691432.2-201ENST00000607222 2038 ntBASIC17.26■□□□□ 0.35
CHD8Q9HCK8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 AP002414.1-201ENST00000391405 1147 ntBASIC17.26■□□□□ 0.35
CHD8Q9HCK8 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHD8Q9HCK8 KRT18P27-201ENST00000427733 1299 ntBASIC17.26■□□□□ 0.35
CHD8Q9HCK8 CEND1P1-201ENST00000451006 455 ntBASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms