Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS11Q9H270 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
VPS11Q9H270 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
VPS11Q9H270 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS11Q9H270 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS11Q9H270 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS11Q9H270 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS11Q9H270 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
VPS11Q9H270 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS11Q9H270 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.78■□□□□ 0.6
VPS11Q9H270 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS11Q9H270 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
VPS11Q9H270 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS11Q9H270 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
VPS11Q9H270 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS11Q9H270 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
VPS11Q9H270 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 AL355802.2-201ENST00000402069 882 ntBASIC18.77■□□□□ 0.6
VPS11Q9H270 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.77■□□□□ 0.6
VPS11Q9H270 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 KRT8P41-201ENST00000533985 1514 ntBASIC18.77■□□□□ 0.6
VPS11Q9H270 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.77■□□□□ 0.6
VPS11Q9H270 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
VPS11Q9H270 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS11Q9H270 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS11Q9H270 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
VPS11Q9H270 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VPS11Q9H270 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
VPS11Q9H270 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS11Q9H270 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS11Q9H270 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.76■□□□□ 0.59
VPS11Q9H270 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
VPS11Q9H270 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.76■□□□□ 0.59
VPS11Q9H270 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VPS11Q9H270 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS11Q9H270 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
VPS11Q9H270 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.76■□□□□ 0.59
VPS11Q9H270 AC092666.2-201ENST00000613287 246 ntBASIC18.76■□□□□ 0.59
VPS11Q9H270 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
VPS11Q9H270 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS11Q9H270 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS11Q9H270 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS11Q9H270 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS11Q9H270 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS11Q9H270 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.76■□□□□ 0.59
VPS11Q9H270 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.76■□□□□ 0.59
VPS11Q9H270 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS11Q9H270 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS11Q9H270 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
VPS11Q9H270 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.75■□□□□ 0.59
VPS11Q9H270 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
VPS11Q9H270 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.75■□□□□ 0.59
VPS11Q9H270 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
VPS11Q9H270 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.75■□□□□ 0.59
VPS11Q9H270 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
VPS11Q9H270 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.75■□□□□ 0.59
VPS11Q9H270 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 KRT17P3-201ENST00000420566 1262 ntBASIC18.75■□□□□ 0.59
VPS11Q9H270 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
VPS11Q9H270 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.75■□□□□ 0.59
VPS11Q9H270 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.75■□□□□ 0.59
VPS11Q9H270 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.75■□□□□ 0.59
VPS11Q9H270 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.75■□□□□ 0.59
VPS11Q9H270 MTDHP1-201ENST00000605323 784 ntBASIC18.75■□□□□ 0.59
VPS11Q9H270 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.75■□□□□ 0.59
VPS11Q9H270 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
VPS11Q9H270 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.75■□□□□ 0.59
VPS11Q9H270 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
VPS11Q9H270 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
VPS11Q9H270 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
VPS11Q9H270 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.74■□□□□ 0.59
VPS11Q9H270 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
VPS11Q9H270 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms