Protein–RNA interactions for Protein: Q9BRF8

CPPED1, Serine/threonine-protein phosphatase CPPED1, humanhuman

Predicted RBP Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPPED1Q9BRF8 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 AC092666.2-201ENST00000613287 246 ntBASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.55■□□□□ 0.4
CPPED1Q9BRF8 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 AC004951.3-201ENST00000418645 1148 ntBASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 AC133681.1-201ENST00000465482 601 ntBASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 ABBA01031674.1-201ENST00000635145 728 ntBASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.54■□□□□ 0.4
CPPED1Q9BRF8 MYLKP1-201ENST00000509077 1580 ntBASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 LTB4R2-202ENST00000528054 3092 ntBASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 RPS2P4-201ENST00000476944 856 ntBASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 MMAB-206ENST00000540016 945 ntTSL 3 BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPPED1Q9BRF8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 AC138028.4-201ENST00000564984 1845 ntBASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CPPED1Q9BRF8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms