Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SEMA3CQ99985 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SEMA3CQ99985 AC034236.2-201ENST00000606662 1610 ntBASIC18.89■□□□□ 0.62
SEMA3CQ99985 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3CQ99985 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3CQ99985 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3CQ99985 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 AL138781.2-201ENST00000617896 1843 ntBASIC18.89■□□□□ 0.61
SEMA3CQ99985 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3CQ99985 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3CQ99985 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3CQ99985 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3CQ99985 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3CQ99985 AC113347.1-201ENST00000413321 391 ntBASIC18.89■□□□□ 0.61
SEMA3CQ99985 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3CQ99985 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3CQ99985 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 AC010203.1-204ENST00000548782 407 ntBASIC18.89■□□□□ 0.61
SEMA3CQ99985 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 AC092865.7-201ENST00000641832 219 ntBASIC18.89■□□□□ 0.61
SEMA3CQ99985 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3CQ99985 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SEMA3CQ99985 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SEMA3CQ99985 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 AL020996.1-203ENST00000536896 2307 ntBASIC18.88■□□□□ 0.61
SEMA3CQ99985 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 LIN28AP1-201ENST00000429574 405 ntBASIC18.88■□□□□ 0.61
SEMA3CQ99985 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 AC009947.2-201ENST00000444014 672 ntBASIC18.88■□□□□ 0.61
SEMA3CQ99985 AL049597.2-201ENST00000565575 961 ntBASIC18.88■□□□□ 0.61
SEMA3CQ99985 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SEMA3CQ99985 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.88■□□□□ 0.61
SEMA3CQ99985 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3CQ99985 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3CQ99985 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3CQ99985 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3CQ99985 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3CQ99985 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3CQ99985 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.87■□□□□ 0.61
SEMA3CQ99985 AL137013.1-201ENST00000432946 1228 ntBASIC18.87■□□□□ 0.61
SEMA3CQ99985 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.87■□□□□ 0.61
SEMA3CQ99985 ATP5G1P1-201ENST00000448724 379 ntBASIC18.87■□□□□ 0.61
SEMA3CQ99985 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.87■□□□□ 0.61
SEMA3CQ99985 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3CQ99985 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.87■□□□□ 0.61
SEMA3CQ99985 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.87■□□□□ 0.61
SEMA3CQ99985 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3CQ99985 AL138966.2-201ENST00000621997 464 ntBASIC18.87■□□□□ 0.61
SEMA3CQ99985 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3CQ99985 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3CQ99985 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SEMA3CQ99985 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3CQ99985 WIZP1-201ENST00000531444 2299 ntBASIC18.86■□□□□ 0.61
SEMA3CQ99985 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3CQ99985 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3CQ99985 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3CQ99985 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SEMA3CQ99985 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms