Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.55■□□□□ 0.72
SMOQ99835 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SMOQ99835 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.55■□□□□ 0.72
SMOQ99835 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.55■□□□□ 0.72
SMOQ99835 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMOQ99835 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
SMOQ99835 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMOQ99835 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMOQ99835 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SMOQ99835 AC018445.3-201ENST00000624177 1945 ntBASIC19.55■□□□□ 0.72
SMOQ99835 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMOQ99835 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.54■□□□□ 0.72
SMOQ99835 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMOQ99835 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMOQ99835 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SMOQ99835 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SMOQ99835 LINC01311-201ENST00000565162 1445 ntBASIC19.54■□□□□ 0.72
SMOQ99835 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMOQ99835 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMOQ99835 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMOQ99835 SPDYE13P-201ENST00000445314 798 ntBASIC19.54■□□□□ 0.72
SMOQ99835 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC19.54■□□□□ 0.72
SMOQ99835 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.54■□□□□ 0.72
SMOQ99835 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.54■□□□□ 0.72
SMOQ99835 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
SMOQ99835 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
SMOQ99835 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMOQ99835 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
SMOQ99835 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
SMOQ99835 AL031598.1-201ENST00000561511 1773 ntBASIC19.54■□□□□ 0.72
SMOQ99835 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SMOQ99835 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.54■□□□□ 0.72
SMOQ99835 ANO7L1-203ENST00000602586 1720 ntBASIC19.54■□□□□ 0.72
SMOQ99835 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SMOQ99835 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMOQ99835 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMOQ99835 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SMOQ99835 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMOQ99835 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMOQ99835 BX323043.1-201ENST00000641006 1765 ntBASIC19.53■□□□□ 0.72
SMOQ99835 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMOQ99835 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMOQ99835 HBZP1-201ENST00000354915 429 ntBASIC19.53■□□□□ 0.72
SMOQ99835 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
SMOQ99835 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC19.53■□□□□ 0.72
SMOQ99835 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.53■□□□□ 0.72
SMOQ99835 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.53■□□□□ 0.72
SMOQ99835 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.53■□□□□ 0.72
SMOQ99835 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SMOQ99835 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMOQ99835 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
SMOQ99835 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMOQ99835 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMOQ99835 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
SMOQ99835 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMOQ99835 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SMOQ99835 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMOQ99835 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.52■□□□□ 0.72
SMOQ99835 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
SMOQ99835 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.52■□□□□ 0.72
SMOQ99835 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SMOQ99835 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SMOQ99835 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMOQ99835 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMOQ99835 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMOQ99835 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMOQ99835 AP000593.1-201ENST00000393668 712 ntBASIC19.52■□□□□ 0.72
SMOQ99835 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.52■□□□□ 0.72
SMOQ99835 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SMOQ99835 FAM86EP-206ENST00000510506 987 ntBASIC19.52■□□□□ 0.72
SMOQ99835 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.52■□□□□ 0.72
SMOQ99835 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.52■□□□□ 0.72
SMOQ99835 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.52■□□□□ 0.72
SMOQ99835 MIR3180-4-201ENST00000582223 153 ntBASIC19.52■□□□□ 0.72
SMOQ99835 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
SMOQ99835 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.52■□□□□ 0.72
SMOQ99835 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
SMOQ99835 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SMOQ99835 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SMOQ99835 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMOQ99835 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
SMOQ99835 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.52■□□□□ 0.71
SMOQ99835 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.51■□□□□ 0.71
SMOQ99835 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
SMOQ99835 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMOQ99835 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.51■□□□□ 0.71
SMOQ99835 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SMOQ99835 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMOQ99835 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMOQ99835 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMOQ99835 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SMOQ99835 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.51■□□□□ 0.71
SMOQ99835 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.51■□□□□ 0.71
SMOQ99835 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SMOQ99835 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.51■□□□□ 0.71
SMOQ99835 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.51■□□□□ 0.71
SMOQ99835 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.51■□□□□ 0.71
SMOQ99835 AL121956.5-201ENST00000625261 221 ntBASIC19.51■□□□□ 0.71
SMOQ99835 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.51■□□□□ 0.71
SMOQ99835 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms