Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 BNIP3P18-201ENST00000593976 575 ntBASIC26.74■■□□□ 1.87
SCAF11Q99590 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC26.74■■□□□ 1.87
SCAF11Q99590 AC124864.1-201ENST00000623408 392 ntBASIC26.74■■□□□ 1.87
SCAF11Q99590 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC26.74■■□□□ 1.87
SCAF11Q99590 AL158211.5-201ENST00000623583 2518 ntBASIC26.74■■□□□ 1.87
SCAF11Q99590 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SCAF11Q99590 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
SCAF11Q99590 PBK-203ENST00000522944 1499 ntTSL 2 BASIC26.74■■□□□ 1.87
SCAF11Q99590 PMS2P7-201ENST00000506558 1336 ntBASIC26.74■■□□□ 1.87
SCAF11Q99590 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SCAF11Q99590 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
SCAF11Q99590 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC26.74■■□□□ 1.87
SCAF11Q99590 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC26.74■■□□□ 1.87
SCAF11Q99590 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
SCAF11Q99590 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SCAF11Q99590 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC26.74■■□□□ 1.87
SCAF11Q99590 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
SCAF11Q99590 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC26.74■■□□□ 1.87
SCAF11Q99590 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC26.74■■□□□ 1.87
SCAF11Q99590 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SCAF11Q99590 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SCAF11Q99590 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SCAF11Q99590 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
SCAF11Q99590 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SCAF11Q99590 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC26.73■■□□□ 1.87
SCAF11Q99590 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
SCAF11Q99590 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SCAF11Q99590 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC26.73■■□□□ 1.87
SCAF11Q99590 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC26.73■■□□□ 1.87
SCAF11Q99590 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SCAF11Q99590 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC26.73■■□□□ 1.87
SCAF11Q99590 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
SCAF11Q99590 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
SCAF11Q99590 FABP5-202ENST00000396359 986 ntTSL 5 BASIC26.73■■□□□ 1.87
SCAF11Q99590 HOTTIP_1.1-201ENST00000620415 57 ntBASIC26.73■■□□□ 1.87
SCAF11Q99590 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC26.73■■□□□ 1.87
SCAF11Q99590 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC26.73■■□□□ 1.87
SCAF11Q99590 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC26.72■■□□□ 1.87
SCAF11Q99590 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC26.72■■□□□ 1.87
SCAF11Q99590 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC26.72■■□□□ 1.87
SCAF11Q99590 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC26.72■■□□□ 1.87
SCAF11Q99590 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC26.72■■□□□ 1.87
SCAF11Q99590 ELP6-205ENST00000439305 880 ntTSL 2 BASIC26.72■■□□□ 1.87
SCAF11Q99590 GUSBP12-201ENST00000513727 720 ntBASIC26.72■■□□□ 1.87
SCAF11Q99590 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC26.72■■□□□ 1.87
SCAF11Q99590 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
SCAF11Q99590 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC26.72■■□□□ 1.87
SCAF11Q99590 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SCAF11Q99590 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC26.71■■□□□ 1.87
SCAF11Q99590 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
SCAF11Q99590 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC26.71■■□□□ 1.87
SCAF11Q99590 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SCAF11Q99590 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SCAF11Q99590 ENSA-205ENST00000361532 792 ntTSL 2 BASIC26.71■■□□□ 1.87
SCAF11Q99590 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SCAF11Q99590 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
SCAF11Q99590 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC26.71■■□□□ 1.87
SCAF11Q99590 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
SCAF11Q99590 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC26.71■■□□□ 1.87
SCAF11Q99590 AL049840.3-201ENST00000602669 611 ntBASIC26.71■■□□□ 1.87
SCAF11Q99590 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
SCAF11Q99590 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC26.71■■□□□ 1.87
SCAF11Q99590 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
SCAF11Q99590 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.87
SCAF11Q99590 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC26.7■■□□□ 1.87
SCAF11Q99590 AC073648.2-201ENST00000510116 352 ntBASIC26.7■■□□□ 1.87
SCAF11Q99590 TERC-201ENST00000602385 541 ntBASIC26.7■■□□□ 1.87
SCAF11Q99590 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SCAF11Q99590 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC26.7■■□□□ 1.86
SCAF11Q99590 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SCAF11Q99590 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC26.7■■□□□ 1.86
SCAF11Q99590 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC26.7■■□□□ 1.86
SCAF11Q99590 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC26.7■■□□□ 1.86
SCAF11Q99590 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
SCAF11Q99590 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
SCAF11Q99590 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
SCAF11Q99590 RCC2P3-201ENST00000418112 1537 ntBASIC26.7■■□□□ 1.86
SCAF11Q99590 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCAF11Q99590 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCAF11Q99590 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
SCAF11Q99590 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
SCAF11Q99590 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
SCAF11Q99590 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC26.69■■□□□ 1.86
SCAF11Q99590 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC26.69■■□□□ 1.86
SCAF11Q99590 AC009065.1-201ENST00000564055 1225 ntBASIC26.69■■□□□ 1.86
SCAF11Q99590 PIN1-206ENST00000587625 878 ntTSL 2 BASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms