Protein–RNA interactions for Protein: Q96QR1

SCGB3A1, Secretoglobin family 3A member 1, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB3A1Q96QR1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SCGB3A1Q96QR1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCGB3A1Q96QR1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCGB3A1Q96QR1 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
SCGB3A1Q96QR1 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
SCGB3A1Q96QR1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCGB3A1Q96QR1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SCGB3A1Q96QR1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.35□□□□□ -0.27
SCGB3A1Q96QR1 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SCGB3A1Q96QR1 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SCGB3A1Q96QR1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 SLC25A6P5-201ENST00000435663 894 ntBASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 AC010536.3-201ENST00000620306 533 ntBASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 AC012317.2-201ENST00000623305 2251 ntBASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SCGB3A1Q96QR1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC13.33□□□□□ -0.27
SCGB3A1Q96QR1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SCGB3A1Q96QR1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.33□□□□□ -0.27
SCGB3A1Q96QR1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 C2orf69P4-201ENST00000565394 541 ntBASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SCGB3A1Q96QR1 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
SCGB3A1Q96QR1 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
SCGB3A1Q96QR1 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.32□□□□□ -0.28
SCGB3A1Q96QR1 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SCGB3A1Q96QR1 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SCGB3A1Q96QR1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCGB3A1Q96QR1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCGB3A1Q96QR1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCGB3A1Q96QR1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SCGB3A1Q96QR1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCGB3A1Q96QR1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SCGB3A1Q96QR1 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms