Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.76■□□□□ 0.91
SCLT1Q96NL6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 AC091076.1-201ENST00000610741 619 ntBASIC20.76■□□□□ 0.91
SCLT1Q96NL6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SCLT1Q96NL6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 MIR3180-5-201ENST00000583743 153 ntBASIC20.75■□□□□ 0.91
SCLT1Q96NL6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SCLT1Q96NL6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 KRT18P38-201ENST00000449496 1282 ntBASIC20.74■□□□□ 0.91
SCLT1Q96NL6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 AC098818.2-201ENST00000564925 2320 ntBASIC20.74■□□□□ 0.91
SCLT1Q96NL6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SCLT1Q96NL6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 UPK3BP1-201ENST00000428678 509 ntBASIC20.73■□□□□ 0.91
SCLT1Q96NL6 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.73■□□□□ 0.91
SCLT1Q96NL6 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.72■□□□□ 0.91
SCLT1Q96NL6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms