Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALPK3Q96L96 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ALPK3Q96L96 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.29■□□□□ 0.84
ALPK3Q96L96 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.29■□□□□ 0.84
ALPK3Q96L96 AC034236.2-201ENST00000606662 1610 ntBASIC20.29■□□□□ 0.84
ALPK3Q96L96 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALPK3Q96L96 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.29■□□□□ 0.84
ALPK3Q96L96 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALPK3Q96L96 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
ALPK3Q96L96 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ALPK3Q96L96 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALPK3Q96L96 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALPK3Q96L96 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALPK3Q96L96 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.29■□□□□ 0.84
ALPK3Q96L96 RNA5SP416-201ENST00000516838 111 ntBASIC20.29■□□□□ 0.84
ALPK3Q96L96 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.29■□□□□ 0.84
ALPK3Q96L96 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ALPK3Q96L96 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.29■□□□□ 0.84
ALPK3Q96L96 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.28■□□□□ 0.84
ALPK3Q96L96 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALPK3Q96L96 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC20.28■□□□□ 0.84
ALPK3Q96L96 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC20.28■□□□□ 0.84
ALPK3Q96L96 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC20.28■□□□□ 0.84
ALPK3Q96L96 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALPK3Q96L96 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.28■□□□□ 0.84
ALPK3Q96L96 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.28■□□□□ 0.84
ALPK3Q96L96 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
ALPK3Q96L96 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALPK3Q96L96 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.28■□□□□ 0.84
ALPK3Q96L96 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALPK3Q96L96 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.28■□□□□ 0.84
ALPK3Q96L96 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC20.28■□□□□ 0.84
ALPK3Q96L96 AL596442.2-201ENST00000610240 980 ntBASIC20.28■□□□□ 0.84
ALPK3Q96L96 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALPK3Q96L96 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALPK3Q96L96 AC006333.2-201ENST00000607957 2099 ntBASIC20.28■□□□□ 0.84
ALPK3Q96L96 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALPK3Q96L96 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALPK3Q96L96 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
ALPK3Q96L96 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.28■□□□□ 0.84
ALPK3Q96L96 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ALPK3Q96L96 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALPK3Q96L96 PNMT-202ENST00000394246 821 ntTSL 2 BASIC20.27■□□□□ 0.84
ALPK3Q96L96 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.27■□□□□ 0.84
ALPK3Q96L96 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.27■□□□□ 0.84
ALPK3Q96L96 AL138831.2-201ENST00000606564 490 ntBASIC20.27■□□□□ 0.84
ALPK3Q96L96 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.27■□□□□ 0.84
ALPK3Q96L96 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ALPK3Q96L96 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALPK3Q96L96 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.27■□□□□ 0.84
ALPK3Q96L96 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.27■□□□□ 0.84
ALPK3Q96L96 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALPK3Q96L96 RCN1P2-201ENST00000398357 915 ntBASIC20.27■□□□□ 0.84
ALPK3Q96L96 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
ALPK3Q96L96 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ALPK3Q96L96 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC20.27■□□□□ 0.84
ALPK3Q96L96 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.27■□□□□ 0.84
ALPK3Q96L96 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC20.27■□□□□ 0.84
ALPK3Q96L96 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALPK3Q96L96 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALPK3Q96L96 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALPK3Q96L96 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALPK3Q96L96 HLA-J-201ENST00000462773 1622 ntBASIC20.26■□□□□ 0.83
ALPK3Q96L96 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 FAM8A3P-201ENST00000427218 844 ntBASIC20.26■□□□□ 0.83
ALPK3Q96L96 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALPK3Q96L96 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 MIR3180-4-201ENST00000582223 153 ntBASIC20.26■□□□□ 0.83
ALPK3Q96L96 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 AC026310.3-201ENST00000625186 2373 ntBASIC20.26■□□□□ 0.83
ALPK3Q96L96 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 AL162377.1-201ENST00000618844 1793 ntBASIC20.26■□□□□ 0.83
ALPK3Q96L96 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ALPK3Q96L96 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALPK3Q96L96 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ALPK3Q96L96 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.26■□□□□ 0.83
ALPK3Q96L96 AL512353.2-201ENST00000448759 1962 ntBASIC20.25■□□□□ 0.83
ALPK3Q96L96 AL137060.1-201ENST00000618151 2648 ntBASIC20.25■□□□□ 0.83
ALPK3Q96L96 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALPK3Q96L96 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALPK3Q96L96 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
ALPK3Q96L96 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALPK3Q96L96 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.25■□□□□ 0.83
ALPK3Q96L96 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.25■□□□□ 0.83
ALPK3Q96L96 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ALPK3Q96L96 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ALPK3Q96L96 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms