Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ITCHQ96J02 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ITCHQ96J02 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.79■□□□□ 0.44
ITCHQ96J02 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ITCHQ96J02 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ITCHQ96J02 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ITCHQ96J02 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.78■□□□□ 0.44
ITCHQ96J02 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.78■□□□□ 0.44
ITCHQ96J02 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.78■□□□□ 0.44
ITCHQ96J02 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
ITCHQ96J02 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
ITCHQ96J02 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.78■□□□□ 0.44
ITCHQ96J02 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ITCHQ96J02 RNA5SP413-201ENST00000516373 109 ntBASIC17.78■□□□□ 0.44
ITCHQ96J02 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.78■□□□□ 0.44
ITCHQ96J02 AL499627.1-201ENST00000569373 2188 ntBASIC17.78■□□□□ 0.44
ITCHQ96J02 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
ITCHQ96J02 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.78■□□□□ 0.44
ITCHQ96J02 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.78■□□□□ 0.44
ITCHQ96J02 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ITCHQ96J02 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITCHQ96J02 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
ITCHQ96J02 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITCHQ96J02 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
ITCHQ96J02 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.77■□□□□ 0.44
ITCHQ96J02 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.77■□□□□ 0.44
ITCHQ96J02 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITCHQ96J02 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITCHQ96J02 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITCHQ96J02 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITCHQ96J02 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.77■□□□□ 0.44
ITCHQ96J02 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITCHQ96J02 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITCHQ96J02 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.77■□□□□ 0.44
ITCHQ96J02 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ITCHQ96J02 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
ITCHQ96J02 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.77■□□□□ 0.44
ITCHQ96J02 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.77■□□□□ 0.44
ITCHQ96J02 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.77■□□□□ 0.44
ITCHQ96J02 AC233263.1-201ENST00000578059 224 ntBASIC17.77■□□□□ 0.44
ITCHQ96J02 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ITCHQ96J02 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ITCHQ96J02 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.77■□□□□ 0.44
ITCHQ96J02 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITCHQ96J02 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.77■□□□□ 0.44
ITCHQ96J02 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.77■□□□□ 0.44
ITCHQ96J02 AC112777.1-201ENST00000540175 1423 ntBASIC17.77■□□□□ 0.44
ITCHQ96J02 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ITCHQ96J02 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.77■□□□□ 0.44
ITCHQ96J02 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ITCHQ96J02 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ITCHQ96J02 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
ITCHQ96J02 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
ITCHQ96J02 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ITCHQ96J02 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
ITCHQ96J02 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
ITCHQ96J02 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
ITCHQ96J02 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
ITCHQ96J02 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ITCHQ96J02 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ITCHQ96J02 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ITCHQ96J02 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.76■□□□□ 0.43
ITCHQ96J02 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ITCHQ96J02 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
ITCHQ96J02 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.76■□□□□ 0.43
ITCHQ96J02 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ITCHQ96J02 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.76■□□□□ 0.43
ITCHQ96J02 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ITCHQ96J02 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
ITCHQ96J02 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ITCHQ96J02 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.76■□□□□ 0.43
ITCHQ96J02 AC068880.1-201ENST00000507289 2297 ntBASIC17.76■□□□□ 0.43
ITCHQ96J02 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.76■□□□□ 0.43
ITCHQ96J02 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.76■□□□□ 0.43
ITCHQ96J02 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.76■□□□□ 0.43
ITCHQ96J02 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ITCHQ96J02 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ITCHQ96J02 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ITCHQ96J02 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.76■□□□□ 0.43
ITCHQ96J02 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ITCHQ96J02 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ITCHQ96J02 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ITCHQ96J02 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.76■□□□□ 0.43
ITCHQ96J02 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ITCHQ96J02 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ITCHQ96J02 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms