Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.78■□□□□ 0.6
SHDQ96IW2 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
SHDQ96IW2 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.78■□□□□ 0.6
SHDQ96IW2 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 SCARNA2-201ENST00000458748 420 ntBASIC18.78■□□□□ 0.6
SHDQ96IW2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.78■□□□□ 0.6
SHDQ96IW2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.78■□□□□ 0.6
SHDQ96IW2 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.78■□□□□ 0.6
SHDQ96IW2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.78■□□□□ 0.6
SHDQ96IW2 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.78■□□□□ 0.6
SHDQ96IW2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 AC243591.1-201ENST00000452967 1364 ntBASIC18.78■□□□□ 0.6
SHDQ96IW2 AC099778.1-201ENST00000568593 1911 ntBASIC18.78■□□□□ 0.6
SHDQ96IW2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SHDQ96IW2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
SHDQ96IW2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHDQ96IW2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.77■□□□□ 0.6
SHDQ96IW2 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
SHDQ96IW2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SHDQ96IW2 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHDQ96IW2 AC018712.1-201ENST00000455767 687 ntBASIC18.77■□□□□ 0.6
SHDQ96IW2 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.77■□□□□ 0.6
SHDQ96IW2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SHDQ96IW2 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.77■□□□□ 0.6
SHDQ96IW2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.77■□□□□ 0.6
SHDQ96IW2 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.77■□□□□ 0.6
SHDQ96IW2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHDQ96IW2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.77■□□□□ 0.6
SHDQ96IW2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SHDQ96IW2 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.76■□□□□ 0.59
SHDQ96IW2 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.76■□□□□ 0.59
SHDQ96IW2 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SHDQ96IW2 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.76■□□□□ 0.59
SHDQ96IW2 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.76■□□□□ 0.59
SHDQ96IW2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.76■□□□□ 0.59
SHDQ96IW2 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC18.76■□□□□ 0.59
SHDQ96IW2 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.76■□□□□ 0.59
SHDQ96IW2 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
SHDQ96IW2 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SHDQ96IW2 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SHDQ96IW2 RBM17P3-201ENST00000417687 1192 ntBASIC18.76■□□□□ 0.59
SHDQ96IW2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.76■□□□□ 0.59
SHDQ96IW2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.76■□□□□ 0.59
SHDQ96IW2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.76■□□□□ 0.59
SHDQ96IW2 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.76■□□□□ 0.59
SHDQ96IW2 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.76■□□□□ 0.59
SHDQ96IW2 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.76■□□□□ 0.59
SHDQ96IW2 AC008687.5-201ENST00000593746 558 ntBASIC18.76■□□□□ 0.59
SHDQ96IW2 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.76■□□□□ 0.59
SHDQ96IW2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.76■□□□□ 0.59
SHDQ96IW2 AL355877.3-201ENST00000622820 899 ntBASIC18.76■□□□□ 0.59
SHDQ96IW2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.76■□□□□ 0.59
SHDQ96IW2 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.76■□□□□ 0.59
SHDQ96IW2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.76■□□□□ 0.59
SHDQ96IW2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.76■□□□□ 0.59
SHDQ96IW2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SHDQ96IW2 AC007375.3-201ENST00000600936 2314 ntBASIC18.75■□□□□ 0.59
SHDQ96IW2 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHDQ96IW2 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHDQ96IW2 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHDQ96IW2 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SHDQ96IW2 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHDQ96IW2 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHDQ96IW2 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.75■□□□□ 0.59
SHDQ96IW2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SHDQ96IW2 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SHDQ96IW2 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHDQ96IW2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHDQ96IW2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SHDQ96IW2 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.75■□□□□ 0.59
SHDQ96IW2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.75■□□□□ 0.59
SHDQ96IW2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.75■□□□□ 0.59
SHDQ96IW2 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.75■□□□□ 0.59
SHDQ96IW2 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.75■□□□□ 0.59
SHDQ96IW2 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SHDQ96IW2 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.75■□□□□ 0.59
SHDQ96IW2 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.75■□□□□ 0.59
SHDQ96IW2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms