Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 NPAP1P7-201ENST00000613027 823 ntBASIC20.18■□□□□ 0.82
PGBD4Q96DM1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 AC006333.2-201ENST00000607957 2099 ntBASIC20.18■□□□□ 0.82
PGBD4Q96DM1 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PGBD4Q96DM1 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 KRT8P26-201ENST00000534154 1276 ntBASIC20.17■□□□□ 0.82
PGBD4Q96DM1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 CLEC4GP1-201ENST00000596555 870 ntBASIC20.17■□□□□ 0.82
PGBD4Q96DM1 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 RNF165-205ENST00000588679 2904 ntBASIC20.17■□□□□ 0.82
PGBD4Q96DM1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.17■□□□□ 0.82
PGBD4Q96DM1 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 DUSP5P1-201ENST00000441325 1139 ntBASIC20.16■□□□□ 0.82
PGBD4Q96DM1 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 AC092119.3-201ENST00000612618 583 ntBASIC20.16■□□□□ 0.82
PGBD4Q96DM1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 AL032819.2-201ENST00000624543 2162 ntBASIC20.16■□□□□ 0.82
PGBD4Q96DM1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 AC016734.2-201ENST00000624325 1377 ntBASIC20.16■□□□□ 0.82
PGBD4Q96DM1 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PGBD4Q96DM1 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 AL450487.1-201ENST00000426799 995 ntBASIC20.15■□□□□ 0.82
PGBD4Q96DM1 PVRIG2P-201ENST00000435460 978 ntBASIC20.15■□□□□ 0.82
PGBD4Q96DM1 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 AC092329.2-201ENST00000598402 547 ntBASIC20.15■□□□□ 0.82
PGBD4Q96DM1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PGBD4Q96DM1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
PGBD4Q96DM1 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms