Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF183Q96D59 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 BUB3-202ENST00000368859 667 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF183Q96D59 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
RNF183Q96D59 RNF152P1-201ENST00000397754 604 ntBASIC13.8□□□□□ -0.2
RNF183Q96D59 AC117947.1-201ENST00000427448 529 ntBASIC13.8□□□□□ -0.2
RNF183Q96D59 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC13.8□□□□□ -0.2
RNF183Q96D59 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF183Q96D59 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF183Q96D59 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.8□□□□□ -0.2
RNF183Q96D59 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 AC139887.4-201ENST00000607877 719 ntBASIC13.8□□□□□ -0.2
RNF183Q96D59 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF183Q96D59 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF183Q96D59 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF183Q96D59 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.8□□□□□ -0.2
RNF183Q96D59 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.8□□□□□ -0.2
RNF183Q96D59 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
RNF183Q96D59 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.8□□□□□ -0.2
RNF183Q96D59 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF183Q96D59 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF183Q96D59 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF183Q96D59 TREX1-205ENST00000625293 1783 ntBASIC13.79□□□□□ -0.2
RNF183Q96D59 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF183Q96D59 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RNF183Q96D59 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF183Q96D59 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF183Q96D59 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.79□□□□□ -0.2
RNF183Q96D59 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.79□□□□□ -0.2
RNF183Q96D59 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
RNF183Q96D59 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF183Q96D59 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF183Q96D59 TPM1-226ENST00000560959 925 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF183Q96D59 NTF6B-201ENST00000591913 560 ntBASIC13.79□□□□□ -0.2
RNF183Q96D59 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC13.79□□□□□ -0.2
RNF183Q96D59 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC13.79□□□□□ -0.2
RNF183Q96D59 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RNF183Q96D59 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF183Q96D59 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RNF183Q96D59 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RNF183Q96D59 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RNF183Q96D59 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.79□□□□□ -0.2
RNF183Q96D59 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RNF183Q96D59 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC13.79□□□□□ -0.2
RNF183Q96D59 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RNF183Q96D59 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RNF183Q96D59 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RNF183Q96D59 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF183Q96D59 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF183Q96D59 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF183Q96D59 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF183Q96D59 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RNF183Q96D59 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF183Q96D59 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC13.78□□□□□ -0.2
RNF183Q96D59 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RNF183Q96D59 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms