Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.28■□□□□ 0.36
CTHRC1Q96CG8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 TERF1P1-201ENST00000311003 1181 ntBASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 MIR3180-4-201ENST00000582223 153 ntBASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CTHRC1Q96CG8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.27■□□□□ 0.35
CTHRC1Q96CG8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTHRC1Q96CG8 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.27■□□□□ 0.35
CTHRC1Q96CG8 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTHRC1Q96CG8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CTHRC1Q96CG8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.27■□□□□ 0.35
CTHRC1Q96CG8 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTHRC1Q96CG8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
CTHRC1Q96CG8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CTHRC1Q96CG8 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CTHRC1Q96CG8 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CTHRC1Q96CG8 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 AL163051.1-201ENST00000569214 1512 ntBASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 AC104581.1-202ENST00000635932 2618 ntBASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 AP000523.1-201ENST00000398242 1049 ntBASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 SEC1P-202ENST00000473944 940 ntBASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CTHRC1Q96CG8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
CTHRC1Q96CG8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms