Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TNFRSF25Q93038 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 AC113347.1-201ENST00000413321 391 ntBASIC21.17■□□□□ 0.98
TNFRSF25Q93038 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 NEK4P2-201ENST00000580004 1012 ntBASIC21.17■□□□□ 0.98
TNFRSF25Q93038 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 BICD1-207ENST00000551848 1962 ntBASIC21.17■□□□□ 0.98
TNFRSF25Q93038 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TNFRSF25Q93038 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 AL163051.1-201ENST00000569214 1512 ntBASIC21.16■□□□□ 0.98
TNFRSF25Q93038 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 TERF1P1-201ENST00000311003 1181 ntBASIC21.16■□□□□ 0.98
TNFRSF25Q93038 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TNFRSF25Q93038 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 AL512604.3-201ENST00000569583 964 ntBASIC21.15■□□□□ 0.98
TNFRSF25Q93038 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 SDHAP2-201ENST00000455183 2001 ntBASIC21.15■□□□□ 0.98
TNFRSF25Q93038 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TNFRSF25Q93038 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
TNFRSF25Q93038 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
TNFRSF25Q93038 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TNFRSF25Q93038 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
TNFRSF25Q93038 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TNFRSF25Q93038 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TNFRSF25Q93038 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.14■□□□□ 0.98
TNFRSF25Q93038 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TNFRSF25Q93038 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFRSF25Q93038 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFRSF25Q93038 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.14■□□□□ 0.97
TNFRSF25Q93038 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFRSF25Q93038 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.14■□□□□ 0.97
TNFRSF25Q93038 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TNFRSF25Q93038 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.14■□□□□ 0.97
TNFRSF25Q93038 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms