Protein–RNA interactions for Protein: Q92743

HTRA1, Serine protease HTRA1, humanhuman

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA1Q92743 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.21■□□□□ 0.35
HTRA1Q92743 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC17.21■□□□□ 0.35
HTRA1Q92743 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 Z99916.2-201ENST00000604037 246 ntBASIC17.21■□□□□ 0.35
HTRA1Q92743 AL121829.2-201ENST00000620908 328 ntBASIC17.21■□□□□ 0.35
HTRA1Q92743 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
HTRA1Q92743 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
HTRA1Q92743 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.21■□□□□ 0.35
HTRA1Q92743 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
HTRA1Q92743 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
HTRA1Q92743 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
HTRA1Q92743 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.2■□□□□ 0.34
HTRA1Q92743 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
HTRA1Q92743 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.2■□□□□ 0.34
HTRA1Q92743 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.2■□□□□ 0.34
HTRA1Q92743 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HTRA1Q92743 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.2■□□□□ 0.34
HTRA1Q92743 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.2■□□□□ 0.34
HTRA1Q92743 MTDHP1-201ENST00000605323 784 ntBASIC17.2■□□□□ 0.34
HTRA1Q92743 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HTRA1Q92743 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.2■□□□□ 0.34
HTRA1Q92743 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HTRA1Q92743 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.2■□□□□ 0.34
HTRA1Q92743 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.2■□□□□ 0.34
HTRA1Q92743 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
HTRA1Q92743 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.2■□□□□ 0.34
HTRA1Q92743 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HTRA1Q92743 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
HTRA1Q92743 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.19■□□□□ 0.34
HTRA1Q92743 AC006333.2-201ENST00000607957 2099 ntBASIC17.19■□□□□ 0.34
HTRA1Q92743 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.19■□□□□ 0.34
HTRA1Q92743 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.19■□□□□ 0.34
HTRA1Q92743 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.19■□□□□ 0.34
HTRA1Q92743 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.19■□□□□ 0.34
HTRA1Q92743 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.19■□□□□ 0.34
HTRA1Q92743 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.19■□□□□ 0.34
HTRA1Q92743 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.19■□□□□ 0.34
HTRA1Q92743 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.19■□□□□ 0.34
HTRA1Q92743 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.19■□□□□ 0.34
HTRA1Q92743 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HTRA1Q92743 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.18■□□□□ 0.34
HTRA1Q92743 AC124067.4-201ENST00000519691 2379 ntBASIC17.18■□□□□ 0.34
HTRA1Q92743 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTRA1Q92743 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HTRA1Q92743 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
HTRA1Q92743 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.18■□□□□ 0.34
HTRA1Q92743 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTRA1Q92743 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTRA1Q92743 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.18■□□□□ 0.34
HTRA1Q92743 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HTRA1Q92743 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HTRA1Q92743 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTRA1Q92743 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.18■□□□□ 0.34
HTRA1Q92743 AC008894.3-201ENST00000624324 3103 ntBASIC17.18■□□□□ 0.34
HTRA1Q92743 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTRA1Q92743 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HTRA1Q92743 SNORA78-201ENST00000459373 127 ntBASIC17.18■□□□□ 0.34
HTRA1Q92743 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
HTRA1Q92743 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.18■□□□□ 0.34
HTRA1Q92743 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
HTRA1Q92743 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HTRA1Q92743 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms