Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 AC006011.2-201ENST00000621313 1158 ntBASIC19.57■□□□□ 0.72
RNF139Q8WU17 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF139Q8WU17 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF139Q8WU17 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF139Q8WU17 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RNF139Q8WU17 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RNF139Q8WU17 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 AC117947.1-201ENST00000427448 529 ntBASIC19.56■□□□□ 0.72
RNF139Q8WU17 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 AC083906.6-201ENST00000641366 219 ntBASIC19.56■□□□□ 0.72
RNF139Q8WU17 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
RNF139Q8WU17 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RNF139Q8WU17 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF139Q8WU17 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.55■□□□□ 0.72
RNF139Q8WU17 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
RNF139Q8WU17 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RNF139Q8WU17 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 MIR1224-201ENST00000408193 85 ntBASIC19.55■□□□□ 0.72
RNF139Q8WU17 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF139Q8WU17 DUX4L26-201ENST00000489078 1255 ntBASIC19.55■□□□□ 0.72
RNF139Q8WU17 YBX1P2-201ENST00000489612 999 ntBASIC19.55■□□□□ 0.72
RNF139Q8WU17 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF139Q8WU17 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.55■□□□□ 0.72
RNF139Q8WU17 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.55■□□□□ 0.72
RNF139Q8WU17 AL023973.1-201ENST00000624619 620 ntBASIC19.55■□□□□ 0.72
RNF139Q8WU17 AC068587.9-201ENST00000641814 219 ntBASIC19.55■□□□□ 0.72
RNF139Q8WU17 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RNF139Q8WU17 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RNF139Q8WU17 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF139Q8WU17 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF139Q8WU17 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF139Q8WU17 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 RNF152P1-201ENST00000397754 604 ntBASIC19.54■□□□□ 0.72
RNF139Q8WU17 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF139Q8WU17 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF139Q8WU17 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF139Q8WU17 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 HEIH-201ENST00000623091 1652 ntBASIC19.54■□□□□ 0.72
RNF139Q8WU17 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF139Q8WU17 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF139Q8WU17 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RNF139Q8WU17 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF139Q8WU17 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RNF139Q8WU17 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RNF139Q8WU17 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms