Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 AC068587.9-201ENST00000641814 219 ntBASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
VPS37AQ8NEZ2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 HTR7P1-201ENST00000538670 1336 ntBASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 AC004951.3-201ENST00000418645 1148 ntBASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 ADM-205ENST00000528544 586 ntTSL 2 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 KRT8P32-201ENST00000512863 1461 ntBASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.79■□□□□ 0.44
VPS37AQ8NEZ2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 AC126763.1-201ENST00000552015 2118 ntBASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 AL354751.1-201ENST00000412768 1863 ntBASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 AC006058.3-201ENST00000606217 1069 ntBASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 AL031985.4-201ENST00000642138 673 ntBASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 AC112777.1-201ENST00000540175 1423 ntBASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 AL162741.1-201ENST00000565563 1558 ntBASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
VPS37AQ8NEZ2 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 AC026271.3-201ENST00000571884 352 ntBASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 AC073648.6-201ENST00000641589 218 ntBASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 KRT16P1-201ENST00000399124 1418 ntBASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.77■□□□□ 0.44
VPS37AQ8NEZ2 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms